RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 M0R3H8 397 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 ABCD4O14678 606 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 MRASO14807 208 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 AIM2O14862 343 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 OR2T1O43869 369 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 TPST2O60704 377 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 MPIG6BO95866 241 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 LGI1O95970 557 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 OPN1SWP03999 348 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 C8BP07358 591 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 SOD3P08294 240 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 VIMP08670 466 aaKnown RBP6.15□□□□□ -1.42
YBX3-206ENST00000536823 DANCRP0C864 163 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 PTAFRP25105 342 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 GRPRP30550 384 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 THBS2P35442 1172 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 RPS5P46782 204 aaKnown RBP6.15□□□□□ -1.42
YBX3-206ENST00000536823 GZMMP51124 257 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 ARFIP2P53365 341 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 SLC25A3Q00325 362 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 CYLC2Q14093 348 aaPredicted RBP6.15□□□□□ -1.42
YBX3-206ENST00000536823 MFSD13AQ14CX5 517 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 MAPRE2Q15555 327 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 OR1Q1Q15612 314 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 NPTX1Q15818 432 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 HSP90B2PQ58FF3 399 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 COQ5Q5HYK3 327 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 INTS11Q5TA45 600 aaKnown RBP6.15□□□□□ -1.42
YBX3-206ENST00000536823 C9orf135Q5VTT2 229 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 REP15Q6BDI9 236 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 TMEM225Q6GV28 225 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 ZNF613Q6PF04 617 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 ULK3Q6PHR2 472 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 KLHL17Q6TDP4 642 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 TMEM108Q6UXF1 575 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 CREB3L2Q70SY1 520 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 ABHD12BQ7Z5M8 362 aaPredicted RBP6.15□□□□□ -1.42
YBX3-206ENST00000536823 YTHDF3Q7Z739 585 aaKnown RBP6.15□□□□□ -1.42
YBX3-206ENST00000536823 PATL1Q86TB9 770 aaKnown RBP6.15□□□□□ -1.42
YBX3-206ENST00000536823 DTX2Q86UW9 622 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 EPHX4Q8IUS5 362 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 WDR31Q8NA23 367 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 SMYD1Q8NB12 490 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 OR8J3Q8NGG0 315 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 OR6S1Q8NH40 331 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 OR10A6Q8NH74 314 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 NEUROG1Q92886 237 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 TAAR8Q969N4 342 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 TAMM41Q96BW9 452 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 SLC25A36Q96CQ1 311 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 BOD1Q96IK1 185 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 MUS81Q96NY9 551 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 ALKBH3Q96Q83 286 aaPredicted RBP6.15□□□□□ -1.42
YBX3-206ENST00000536823 EPYCQ99645 322 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 ARHGDIGQ99819 225 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 FOXB1Q99853 325 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 WFDC6Q9BQY6 131 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 TMEM43Q9BTV4 400 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 TMEM27Q9HBJ8 222 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 MED4Q9NPJ6 270 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 SAR1AQ9NR31 198 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 SELENONQ9NZV5 590 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 B3GAT1Q9P2W7 334 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 SEC14L4Q9UDX3 406 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 MGAT4BQ9UQ53 548 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 RCE1Q9Y256 329 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 B3GALT5Q9Y2C3 310 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 AMDHD2Q9Y303 409 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 MAGED1Q9Y5V3 778 aaPredicted RBP6.15□□□□□ -1.42
YBX3-206ENST00000536823 CAPN7Q9Y6W3 813 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 LOC102725191A0A1B0GVB3 256 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 A0A1W2PR80 420 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 M0QX08 132 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SLC22A2O15244 555 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 TRAF3IP2O43734 574 aaPredicted RBP6.14□□□□□ -1.43
YBX3-206ENST00000536823 CHP2O43745 196 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 ZNF432O94892 652 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 NPPAP01160 153 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 BGLAPP02818 100 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 ZNF43P17038 809 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 PTNP21246 168 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SELENOPP49908 381 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 ZNF83P51522 516 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 CRYBA2P53672 197 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 CDH12P55289 794 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SH3BGRP55822 239 aaPredicted RBP6.14□□□□□ -1.43
YBX3-206ENST00000536823 ATP5J2P56134 94 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 CLDN17P56750 224 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 LGALS3BPQ08380 585 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SPOCK1Q08629 439 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SF3A3Q12874 501 aaKnown RBP eCLIP6.14□□□□□ -1.43
YBX3-206ENST00000536823 HNRNPA0Q13151 305 aaKnown RBP6.14□□□□□ -1.43
YBX3-206ENST00000536823 DUSP7Q16829 419 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 PGGHGQ32M88 737 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 MMEL1Q495T6 779 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 RABL3Q5HYI8 236 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 NANOGP8Q6NSW7 305 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 NIPAL3Q6P499 406 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 KLHL24Q6TFL4 600 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 H1FNTQ75WM6 255 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms