RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 SLC22A18ASQ8N1D0 253 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 MUC20Q8N307 709 aaPredicted RBP12.77□□□□□ -0.37
LIG1-203ENST00000536218 C17orf47Q8NEP4 570 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 HAVCR2Q8TDQ0 301 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 ZNF354BQ96LW1 612 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 GGACTQ9BVM4 153 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 C8orf33Q9H7E9 229 aaPredicted RBP12.77□□□□□ -0.37
LIG1-203ENST00000536218 POT1Q9NUX5 634 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 HRASLS2Q9NWW9 162 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 ZNF230Q9UIE0 474 aaPredicted RBP12.77□□□□□ -0.37
LIG1-203ENST00000536218 F5H0A9 414 aaPredicted RBP12.77□□□□□ -0.37
LIG1-203ENST00000536218 SYT5O00445 386 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 REM1O75628 298 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 MRPL3P09001 348 aaKnown RBP12.77□□□□□ -0.37
LIG1-203ENST00000536218 LAP3P28838 519 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 OR52W1Q6IF63 320 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 CPOQ8IVL8 374 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 ACBD7Q8N6N7 88 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 TMEM99Q8N816 258 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 FGF11Q92914 225 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 DERL3Q96Q80 235 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 MED20Q9H944 212 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 CAPN10Q9HC96 672 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 POLE3Q9NRF9 147 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 TREM2Q9NZC2 230 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 MMP17Q9ULZ9 603 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 MRPS2Q9Y399 296 aaKnown RBP12.77□□□□□ -0.37
LIG1-203ENST00000536218 MTCH2Q9Y6C9 303 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 KDM4EB2RXH2 506 aaPredicted RBP12.76□□□□□ -0.37
LIG1-203ENST00000536218 SDHAP31040 664 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 KHKP50053 298 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 CLDN12P56749 244 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 RPS15AP62244 130 aaKnown RBP12.76□□□□□ -0.37
LIG1-203ENST00000536218 TGM3Q08188 693 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 KRBOX4Q5JUW0 171 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 OR6T1Q8NGN1 323 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 C1orf216Q8TAB5 229 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 SLC22A18Q96BI1 424 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 FAM46AQ96IP4 442 aaKnown RBP12.76□□□□□ -0.37
LIG1-203ENST00000536218 CLCC1Q96S66 551 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 VRK1Q99986 396 aaPredicted RBP12.76□□□□□ -0.37
LIG1-203ENST00000536218 CES1P1Q9UKY3 287 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 A4GNTQ9UNA3 340 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 NAP1L6A6NFF2 107 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 FLRT2O43155 660 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 CTSEP14091 401 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 LSSP48449 732 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 PNLIPRP2P54317 469 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 TAF13Q15543 124 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 NDUFA9Q16795 377 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 TDHQ8IZJ6 230 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 ZNF433Q8N7K0 673 aaPredicted RBP12.76□□□□□ -0.37
LIG1-203ENST00000536218 DNAAF1Q8NEP3 725 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 BRIX1Q8TDN6 353 aaKnown RBP12.76□□□□□ -0.37
LIG1-203ENST00000536218 DUSP19Q8WTR2 217 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 FAM117AQ9C073 453 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 LAMA1P25391 3075 aa12.76□□□□□ -0.37
LIG1-203ENST00000536218 OR2AT4A6NND4 320 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 GSTZ1O43708 216 aaPredicted RBP12.75□□□□□ -0.37
LIG1-203ENST00000536218 LDB3O75112 727 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 ITGA10O75578 1167 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 TNFP01375 233 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 CD2P06729 351 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 EPXP11678 715 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 ABOP16442 354 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 OR2B8PP59922 312 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 FUT5Q11128 374 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 RUNX2Q13950 521 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 DEFB110Q30KQ9 67 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 BEST3Q8N1M1 668 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 GTPBP8Q8N3Z3 284 aaPredicted RBP12.75□□□□□ -0.37
LIG1-203ENST00000536218 OR5T3Q8NGG3 340 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 APOBEC4Q8WW27 367 aaKnown RBP12.75□□□□□ -0.37
LIG1-203ENST00000536218 C3orf49Q96BT1 292 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 C14orf144Q96I85 54 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 OR2A5Q96R48 311 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 OR7D2Q96RA2 312 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 CHRDQ9H2X0 955 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 A0A0A6YYC8 382 aaPredicted RBP12.75□□□□□ -0.37
LIG1-203ENST00000536218 URADA6NGE7 173 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 I3L1I5 382 aaPredicted RBP12.75□□□□□ -0.37
LIG1-203ENST00000536218 EIF4E2O60573 245 aaKnown RBP12.75□□□□□ -0.37
LIG1-203ENST00000536218 FCMRO60667 390 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 IGHV4-34P06331 123 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 THEGLP0DJG4 465 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 SAGP10523 405 aaPredicted RBP12.75□□□□□ -0.37
LIG1-203ENST00000536218 FZD5Q13467 585 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 ELFN2Q5R3F8 820 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 FCRL6Q6DN72 434 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 VRK2Q86Y07 508 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 ZNF383Q8NA42 475 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 SLC37A2Q8TED4 501 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 A6NCN8 305 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 H0YGG7 62 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 NDUFB6O95139 128 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 IL5P05113 134 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 NME1P15531 152 aaKnown RBP12.75□□□□□ -0.37
LIG1-203ENST00000536218 CPT2P23786 658 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms