RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 FCGR1AP12314 374 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 PRKACGP22612 351 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 IL32P24001 234 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 MPGP29372 298 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 PEX19P40855 299 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 CSNK1A1P48729 337 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 ROR2Q01974 943 aaKnown RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 TAF11Q15544 211 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 GABRA6Q16445 453 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 RFX4Q33E94 735 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 ZNF787Q6DD87 383 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 HMBOX1Q6NT76 420 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 SHQ1Q6PI26 577 aaKnown RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 ZNF620Q6ZNG0 422 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 ABHD12BQ7Z5M8 362 aaPredicted RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 AMIGO2Q86SJ2 522 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 STEAP2Q8NFT2 490 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 OR6N1Q8NGY5 312 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 ZNF519Q8TB69 540 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 TMEM54Q969K7 222 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 ZNF566Q969W8 418 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 S100PBPQ96BU1 408 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 ZNF837Q96EG3 531 aaPredicted RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 SAMD8Q96LT4 415 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 GPX7Q96SL4 187 aaPredicted RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 POLDIP3Q9BY77 421 aaKnown RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 MRPL13Q9BYD1 178 aaKnown RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 NDEL1Q9GZM8 345 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 OR10A4Q9H209 315 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 OR52D1Q9H346 318 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 CRLF2Q9HC73 371 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 GPR35Q9HC97 309 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 NRIP3Q9NQ35 241 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 PDP1Q9P0J1 537 aaPredicted RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 NDRG3Q9UGV2 375 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 MAGED1Q9Y5V3 778 aaPredicted RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 HRNRQ86YZ3 2850 aaPredicted RBP10.61□□□□□ -0.71
CHD4-203ENST00000535717 CIB4A0PJX0 185 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 SH3D21A4FU49 640 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 TRMUO75648 421 aaKnown RBP10.6□□□□□ -0.71
CHD4-203ENST00000535717 RAD51DO75771 328 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 IGHG1P01857 330 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 THBDP07204 575 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 IGFBP1P08833 259 aaPredicted RBP10.6□□□□□ -0.71
CHD4-203ENST00000535717 ACADSP16219 412 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 PPP3CBP16298 524 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 CDH2P19022 906 aaPredicted RBP10.6□□□□□ -0.71
CHD4-203ENST00000535717 ACVR1BP36896 505 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 BLMHQ13867 455 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 HIST3H3Q16695 136 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 CEACAM16Q2WEN9 425 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 ZFP1Q6P2D0 407 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 LRFN4Q6PJG9 635 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 CD300LDQ6UXZ3 194 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 DPY19L2P2Q6ZN68 376 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 RASSF6Q6ZTQ3 369 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 FAM122BQ7Z309 247 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 HDDC2Q7Z4H3 204 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 ARIH2OSQ8N7S6 290 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 SYT14Q8NB59 555 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 FAM222BQ8WU58 562 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 HDAC2Q92769 488 aaKnown RBP10.6□□□□□ -0.71
CHD4-203ENST00000535717 NRBF2Q96F24 287 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 Q96M85 177 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 DACH2Q96NX9 599 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 MUS81Q96NY9 551 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 KCNK17Q96T54 332 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 NIPSNAP1Q9BPW8 284 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 MED18Q9BUE0 208 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 BDH2Q9BUT1 245 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 EGLN3Q9H6Z9 239 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 B3GAT2Q9NPZ5 323 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 GLTPQ9NZD2 209 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 GRHPRQ9UBQ7 328 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 IER3IP1Q9Y5U9 82 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 CDH10Q9Y6N8 788 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 ITPR2Q14571 2701 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 FBN2P35556 2912 aa10.6□□□□□ -0.71
CHD4-203ENST00000535717 PRR14LQ5THK1 2151 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 ABCA12Q86UK0 2595 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 A6NHS1 94 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 A6NIZ1 184 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 OR5H1A6NKK0 313 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 CENPBD1B2RD01 187 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 PPP1R3DO95685 299 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 TP53P04637 393 aaPredicted RBP10.59□□□□□ -0.71
CHD4-203ENST00000535717 EPXP11678 715 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 GSTM3P21266 225 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 SLC6A6P31641 620 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 ARHGDIAP52565 204 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 CLRN1P58418 232 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 RAP1BP61224 184 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 RAP1AP62834 184 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 ARF1P84077 181 aaKnown RBP10.59□□□□□ -0.71
CHD4-203ENST00000535717 MYBPC1Q00872 1141 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 TGFBR3Q03167 851 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 FAM205BPQ63HN1 556 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 OR7E24Q6IFN5 339 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 KLHL17Q6TDP4 642 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 ZNF295-AS1Q8N0V1 137 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms