RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 LMX1BO60663 402 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 UBL3O95164 117 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 LYPD3O95274 346 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 THY1P04216 161 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 UMPSP11172 480 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 ZP4Q12836 540 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 MMEL1Q495T6 779 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 NANOGP8Q6NSW7 305 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 CCDC80Q76M96 950 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 WDFY1Q8IWB7 410 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF566Q969W8 418 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 MS4A3Q96HJ5 214 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 ECSITQ9BQ95 431 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 TMEM120AQ9BXJ8 343 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 SHARPINQ9H0F6 387 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 PCDHAC1Q9H158 963 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 NANOGQ9H9S0 305 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 TAS2R5Q9NYW4 299 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 GLTPQ9NZD2 209 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 KCNS2Q9ULS6 477 aa13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 YLPM1P49750 1951 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-204ENST00000535313 IGHV4-61A0A0C4DH41 118 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 LOC100289279A0A1B0GTE1 492 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 TMEM129A0AVI4 362 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 RNF212BA8MTL3 300 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 FBP2O00757 339 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 TROVE2P10155 538 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 DAOP14920 347 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF14P17017 642 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 LSP1P33241 339 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 GIPRP48546 466 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 GZMMP51124 257 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 RAB1AP62820 205 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 GALK2Q01415 458 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 GKAP1Q5VSY0 366 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 FAM166AQ6J272 317 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 PIWIL3Q7Z3Z3 882 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 NANOGNBQ7Z5D8 188 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 LRRC17Q8N6Y2 441 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 OR8J3Q8NGG0 315 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 TMEM54Q969K7 222 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 LRRC58Q96CX6 371 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 SLC25A44Q96H78 314 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF426Q9BUY5 554 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 BPESC1Q9GZL8 116 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 MED4Q9NPJ6 270 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 BAG5Q9UL15 447 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 SH3GLB1Q9Y371 365 aa13.98□□□□□ -0.17
CLSTN3-204ENST00000535313 STAMBPO95630 424 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 BCL10O95999 233 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 IFNA14P01570 189 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 ADRA2AP08913 450 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 ASAH2BP0C7U1 165 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 OR8G3PP0DMU2 310 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF35P13682 527 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 EVX1P49640 407 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 TAS2R41P59536 307 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 RPS23P62266 143 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 MAPRE2Q15555 327 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 RABL3Q5HYI8 236 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 COQ5Q5HYK3 327 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 TSPYL5Q86VY4 417 aaPredicted RBP13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 CARM1Q86X55 608 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 CDK20Q8IZL9 346 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 ZCCHC24Q8N2G6 241 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 MRPL24Q96A35 216 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF75AQ96N20 296 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF224Q9NZL3 707 aa13.97□□□□□ -0.17
CLSTN3-204ENST00000535313 BBIP1A8MTZ0 92 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 BLOC1S5-TXNDC5H3BN57 136 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 MRASO14807 208 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 FARS2O95363 451 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 NPPAP01160 153 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 IGHG1P01857 330 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF23P17027 643 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 GLRXP35754 106 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 ARFIP2P53365 341 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 CRYBA2P53672 197 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 MELKQ14680 651 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 ERICH5Q6P6B1 374 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 DEF8Q6ZN54 512 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 CALHM3Q86XJ0 350 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 SKA3Q8IX90 412 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 SLC22A24Q8N4F4 322 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 UBASH3BQ8TF42 649 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 TMEM158Q8WZ71 300 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 MSI2Q96DH6 328 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 PRSS27Q9BQR3 290 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 CHODLQ9H9P2 273 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 TMEM38BQ9NVV0 291 aa13.96□□□□□ -0.17
CLSTN3-204ENST00000535313 MALRD1Q5VYJ5 2156 aa13.96□□□□□ -0.18
CLSTN3-204ENST00000535313 A0A1W2PRG6 482 aa13.95□□□□□ -0.18
CLSTN3-204ENST00000535313 MCIDASD6RGH6 385 aa13.95□□□□□ -0.18
CLSTN3-204ENST00000535313 M0R233 179 aa13.95□□□□□ -0.18
CLSTN3-204ENST00000535313 FXYD1O00168 92 aa13.95□□□□□ -0.18
CLSTN3-204ENST00000535313 DHHO43323 396 aa13.95□□□□□ -0.18
CLSTN3-204ENST00000535313 SYNGR3O43761 229 aa13.95□□□□□ -0.18
CLSTN3-204ENST00000535313 OR5F1O95221 314 aa13.95□□□□□ -0.18
CLSTN3-204ENST00000535313 MT-ND1P03886 318 aa13.95□□□□□ -0.18
CLSTN3-204ENST00000535313 SERPINA5P05154 406 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms