RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ZNF888P0CJ79 500 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 GIMD1P0DJR0 217 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 DDTP30046 118 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 DLSTP36957 453 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 CSNK1EP49674 416 aaKnown RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ART1P52961 327 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 DLX5P56178 289 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 KCNJ10P78508 379 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ID2Q02363 134 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 RUNX2Q13950 521 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 DOC2BQ14184 412 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 GAMTQ14353 236 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 SMARCD3Q6STE5 483 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 METAP1DQ6UB28 335 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ARHGEF39Q8N4T4 335 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 OR51G2Q8NGK0 314 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 FBLIM1Q8WUP2 373 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 C16orf58Q96GQ5 468 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 SLC35A5Q9BS91 424 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 GLIPR2Q9H4G4 154 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 FN3KRPQ9HA64 309 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 MYNNQ9NPC7 610 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 GAR1Q9NY12 217 aaKnown RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 FBXW2Q9UKT8 454 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ATMQ13315 3056 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 RTTNQ86VV8 2226 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 UNC13CQ8NB66 2214 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 CENPVL1A0A0U1RR11 272 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 B4DGG1 531 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 CLDN4O14493 209 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 LDLRAD4O15165 306 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ERI3O43414 337 aaKnown RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 SC5DO75845 299 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 APBB3O95704 486 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 IFNA2P01563 188 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ST6GAL1P15907 406 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 RAB6AP20340 208 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 GPR143P51810 404 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 CDH11P55287 796 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ZP1P60852 638 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 PITPNAQ00169 270 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 EXOSC6Q5RKV6 272 aaKnown RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ABHD17CQ6PCB6 329 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ZNF574Q6ZN55 896 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 OR2W3Q7Z3T1 314 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 LRRC28Q86X40 367 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 NANOGP1Q8N7R0 232 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 CASTOR1Q8WTX7 329 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 DMRTA2Q96SC8 542 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 OPA3Q9H6K4 179 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ACAD8Q9UKU7 415 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 CACNA1EQ15878 2313 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 C7orf66A4D0T2 115 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 FAM221BA6H8Z2 402 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 CCSO14618 274 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 DVL2O14641 736 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 SLC25A12O75746 678 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 IFNA10P01566 189 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 HOXC4P09017 264 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 HSD3B1P14060 373 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 NME2P22392 152 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 HSD3B2P26439 372 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 PTH2RP49190 550 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 STARD6P59095 220 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 MAP4K2Q12851 820 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ZNF660Q6AZW8 331 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 FCRLBQ6BAA4 426 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 OR4C11Q6IEV9 310 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 CDPF1Q6NVV7 123 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ACOT4Q8N9L9 421 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ZCCHC10Q8TBK6 192 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 TGM7Q96PF1 710 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ZNF649Q9BS31 505 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 PELI2Q9HAT8 420 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ALPK2Q86TB3 2170 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 GPR89AB7ZAQ6 455 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 HSPA12AO43301 675 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 GPR37L1O60883 481 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 AIFM1O95831 613 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 IFNA17P01571 189 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 GPR89BP0CG08 455 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 EPXP11678 715 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 CD80P33681 288 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 MPIP34949 423 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 GFERP55789 205 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 C4orf17Q53FE4 359 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 SLC22A10Q63ZE4 541 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 MRM1Q6IN84 353 aaKnown RBP8.25□□□□□ -1.09
SF3B2-216ENST00000534765 TNFAIP8L2Q6P589 184 aaPredicted RBP8.25□□□□□ -1.09
SF3B2-216ENST00000534765 CARFQ8N187 725 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 OR52I1Q8NGK6 324 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 OR8J1Q8NGP2 316 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 OR2I1PQ8NGU4 316 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 SPRYD4Q8WW59 207 aaPredicted RBP8.25□□□□□ -1.09
SF3B2-216ENST00000534765 TMED6Q8WW62 240 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 HGDQ93099 445 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 SENP5Q96HI0 755 aaPredicted RBP8.25□□□□□ -1.09
SF3B2-216ENST00000534765 EPYCQ99645 322 aa8.25□□□□□ -1.09
SF3B2-216ENST00000534765 NAA11Q9BSU3 229 aaPredicted RBP8.25□□□□□ -1.09
SF3B2-216ENST00000534765 A0A0B4J2A0 478 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms