RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-215	ENST00000533440	TST	Q16762	297 aa	Known RBP	6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	MS4A18	Q3C1V0	323 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	FAM69A	Q5T7M9	428 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	ANXA8L1	Q5VT79	327 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	CARD17	Q5XLA6	110 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	ATG16L1	Q676U5	607 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	ZNF836	Q6ZNA1	936 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	H1FNT	Q75WM6	255 aa	Predicted RBP	6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	TRMT10C	Q7L0Y3	403 aa	Known RBP	6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	ZNF771	Q7L3S4	317 aa	Predicted RBP	6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	VRK2	Q86Y07	508 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	PEX5L	Q8IYB4	626 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	ADPRHL1	Q8NDY3	354 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	SLC30A7	Q8NEW0	376 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	ZNF417	Q8TAU3	575 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	PNPT1	Q8TCS8	783 aa	Known RBP	6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	C11orf40	Q8WZ69	217 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	CCL17	Q92583	94 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	TAAR8	Q969N4	342 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	ZNF587	Q96SQ5	575 aa	Predicted RBP	6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	SLC35A5	Q9BS91	424 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	MRI1	Q9BV20	369 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	EMC6	Q9BV81	110 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	NPHS2	Q9NP85	383 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	B3GAT2	Q9NPZ5	323 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	TCF7L2	Q9NQB0	619 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	C1RL	Q9NZP8	487 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	CHST2	Q9Y4C5	530 aa		6.58	□□□□□ -1.36
NXF1-215	ENST00000533440	TANC2	Q9HCD6	1990 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	MDFIC2	A0A1B0GVS7	189 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	ISPD	A4D126	451 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	SLC22A31	A6NKX4	558 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	SRRM5	B3KS81	715 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440		F5H0A9	414 aa	Predicted RBP	6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	HOXA3	O43365	443 aa	Predicted RBP	6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	OR2T1	O43869	369 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	MFN2	O95140	757 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	TSPAN15	O95858	294 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	GPANK1	O95872	356 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	HPR	P00739	348 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	IGHV1-46	P01743	117 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	IGHV2-70	P01814	119 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	MT-ND5	P03915	603 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	LCK	P06239	509 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	ADH4	P08319	380 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	OR8G3P	P0DMU2	310 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	NR2F1	P10589	423 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	HLA-DOB	P13765	273 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	GRPR	P30550	384 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	CASQ1	P31415	396 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	CD80	P33681	288 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	CHI3L1	P36222	383 aa	Predicted RBP	6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	ZNF81	P51508	661 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	MMP15	P51511	669 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	UCP2	P55851	309 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	RBBP4	Q09028	425 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	MAD2L1	Q13257	205 aa	Predicted RBP	6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	HLX	Q14774	488 aa	Predicted RBP	6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	TAF9	Q16594	264 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	SMU1	Q2TAY7	513 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	BEAN1	Q3B7T3	259 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	LIN52	Q52LA3	116 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	RNF220	Q5VTB9	566 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	FAM205BP	Q63HN1	556 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	C6orf89	Q6UWU4	347 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	SYT10	Q6XYQ8	523 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440		Q6ZPA2	131 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	PIWIL3	Q7Z3Z3	882 aa	Known RBP	6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	NET1	Q7Z628	596 aa	Predicted RBP	6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	JAZF1	Q86VZ6	243 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	SNX32	Q86XE0	403 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	UEVLD	Q8IX04	471 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	SKA3	Q8IX90	412 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	PARP8	Q8N3A8	854 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	CLIP4	Q8N3C7	705 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	VPS37A	Q8NEZ2	397 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	OR52E2	Q8NGJ4	325 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	OR52P1P	Q8NH57	321 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	AGR3	Q8TD06	166 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	TESC	Q96BS2	214 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	UPRT	Q96BW1	309 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	TUBGCP3	Q96CW5	907 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	SLC41A3	Q96GZ6	507 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	TXNDC15	Q96J42	360 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	ULBP2	Q9BZM5	246 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	BCL2L14	Q9BZR8	327 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	C1orf198	Q9H425	327 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	C12orf10	Q9HB07	376 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	PATZ1	Q9HBE1	687 aa	Known RBP	6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	NOP53	Q9NZM5	478 aa	Known RBP	6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	PYCARD	Q9ULZ3	195 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	GPR45	Q9Y5Y3	372 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	NPTN	Q9Y639	398 aa		6.57	□□□□□ -1.36
NXF1-215	ENST00000533440	IGKV1D-42	A0A075B6H8	117 aa		6.56	□□□□□ -1.36
NXF1-215	ENST00000533440	IGHV3OR16-10	A0A075B7F0	116 aa		6.56	□□□□□ -1.36
NXF1-215	ENST00000533440	COPE	O14579	308 aa		6.56	□□□□□ -1.36
NXF1-215	ENST00000533440	PIN1P1	O15428	100 aa		6.56	□□□□□ -1.36
NXF1-215	ENST00000533440	SPRY3	O43610	288 aa		6.56	□□□□□ -1.36
NXF1-215	ENST00000533440	CLPX	O76031	633 aa		6.56	□□□□□ -1.36
NXF1-215	ENST00000533440	CRYBA1	P05813	215 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms