RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 BNIP2Q12982 314 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 PAGE3Q5JUK9 113 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 DCAF12L2Q5VW00 463 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 ZFP1Q6P2D0 407 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 RBMS3Q6XE24 437 aaKnown RBP10.66□□□□□ -0.7
CAPN1-223ENST00000533079 OLIG3Q7RTU3 272 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 MDP1Q86V88 176 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 CARM1Q86X55 608 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 KRTCAP2Q8N6L1 136 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 SYT14Q8NB59 555 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 OR8J3Q8NGG0 315 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 OR8J2Q8NGG1 315 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 XAGE5Q8WWM1 108 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 CNOT9Q92600 299 aaKnown RBP10.66□□□□□ -0.7
CAPN1-223ENST00000533079 GTF2H4Q92759 462 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 VPS33AQ96AX1 596 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 SLITRK2Q9H156 845 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 RMND5AQ9H871 391 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 S100A14Q9HCY8 104 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 ADPRHL2Q9NX46 363 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 ADA2Q9NZK5 511 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 FBXL3Q9UKT7 428 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 NOX1Q9Y5S8 564 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 GMEB1Q9Y692 573 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 DSPPQ9NZW4 1301 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 PRORSD1PA6NEY8 169 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 AGAP5A6NIR3 686 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 CLDN24A6NM45 220 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 A8MVM7 634 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 ZNF99A8MXY4 864 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-223ENST00000533079 TMEM229AB2RXF0 380 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 WNT9BO14905 357 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 AKAP8O43823 692 aaKnown RBP10.65□□□□□ -0.7
CAPN1-223ENST00000533079 SCN2BO60939 215 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 ZNF432O94892 652 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 PRSS23O95084 383 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 FSHBP01225 129 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 CHRM4P08173 479 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 ARAFP10398 606 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 COL8A2P25067 703 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 S100A3P33764 101 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 TXNL4AP83876 142 aaKnown RBP10.65□□□□□ -0.7
CAPN1-223ENST00000533079 ARF1P84077 181 aaKnown RBP10.65□□□□□ -0.7
CAPN1-223ENST00000533079 MS4A2Q01362 244 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 ZP4Q12836 540 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 NFYCQ13952 458 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 GSG1Q2KHT4 349 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 GPAT3Q53EU6 434 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 LRIF1Q5T3J3 769 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 SAXO2Q658L1 398 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 NANOGP8Q6NSW7 305 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 EPHX4Q8IUS5 362 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 CLECL1Q8IZS7 167 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 GPR137CQ8N3F9 429 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 OR4A15Q8NGL6 344 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 POP5Q969H6 163 aaKnown RBP10.65□□□□□ -0.7
CAPN1-223ENST00000533079 YIPF5Q969M3 257 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 TRNT1Q96Q11 434 aaKnown RBP10.65□□□□□ -0.7
CAPN1-223ENST00000533079 CGREF1Q99674 301 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 NANOGQ9H9S0 305 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 MED29Q9NX70 200 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 CMTM6Q9NX76 183 aa10.65□□□□□ -0.7
CAPN1-223ENST00000533079 PRKDCP78527 4128 aaKnown RBP10.64□□□□□ -0.71
CAPN1-223ENST00000533079 ZNF503-AS2A6NEH8 195 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 NME4O00746 187 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 PLPP2O43688 288 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 DEAF1O75398 565 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-223ENST00000533079 KRT36O76013 467 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 TFPTP0C1Z6 253 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 ZNF35P13682 527 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 ZNF43P17038 809 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 RPS4Y1P22090 263 aaKnown RBP10.64□□□□□ -0.71
CAPN1-223ENST00000533079 UQCRC2P22695 453 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 PRTN3P24158 256 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 ALDH3B1P43353 468 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 CAPZA2P47755 286 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 ANXA11P50995 505 aaKnown RBP10.64□□□□□ -0.71
CAPN1-223ENST00000533079 SLC7A2P52569 658 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 GALK2Q01415 458 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 TEKQ02763 1124 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 FLOT2Q14254 428 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 TUSC1Q2TAM9 212 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 PCGF3Q3KNV8 242 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 MRPL2Q5T653 305 aaKnown RBP10.64□□□□□ -0.71
CAPN1-223ENST00000533079 ANXA8L1Q5VT79 327 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 TNFAIP8L2Q6P589 184 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-223ENST00000533079 DHDDSQ86SQ9 333 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 PIK3C3Q8NEB9 887 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 RAB8BQ92930 207 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 ZG16BQ96DA0 208 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 NEURL3Q96EH8 262 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 ITCHQ96J02 903 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 OR52E6Q96RD3 313 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 SYT3Q9BQG1 590 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 UNKLQ9H9P5 680 aaKnown RBP10.64□□□□□ -0.71
CAPN1-223ENST00000533079 GPR35Q9HC97 309 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 NKX1-2Q9UD57 310 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-223ENST00000533079 GPR160Q9UJ42 338 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 PPIAL4AQ9Y536 164 aa10.64□□□□□ -0.71
CAPN1-223ENST00000533079 VWFP04275 2813 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms