RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 RPS6KA3P51812 740 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 OR2B6P58173 313 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 GABARAPL2P60520 117 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 SNRPD2P62316 118 aaKnown RBP7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 HGFACQ04756 655 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 EFNB3Q15768 340 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 MSMPQ1L6U9 139 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 RFX4Q33E94 735 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 TBRG1Q3YBR2 411 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 ZBED5Q49AG3 693 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 TTC23Q5W5X9 447 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 TNFAIP8L2Q6P589 184 aaPredicted RBP7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 ERICH5Q6P6B1 374 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 DHRS4L2Q6PKH6 230 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 GPR141Q7Z602 305 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 ZDHHC13Q8IUH4 622 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 RFLNBQ8N5W9 214 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 TMEM99Q8N816 258 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 ZNF563Q8TA94 476 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 MIPOL1Q8TD10 442 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 CYGBQ8WWM9 190 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 TMEM45BQ96B21 275 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 NMD3Q96D46 503 aaKnown RBP7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 ZHX1-C8orf76Q96EF9 292 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 AURKBQ96GD4 344 aaPredicted RBP7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 SLC35G5Q96KT7 338 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 SLC38A2Q96QD8 506 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 OR52E6Q96RD3 313 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 SEPHS2Q99611 448 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 DOK1Q99704 481 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 VRK1Q99986 396 aaPredicted RBP7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 RBM4BQ9BQ04 359 aaKnown RBP7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 RBM4Q9BWF3 364 aaKnown RBP7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 GABARAPL1Q9H0R8 117 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 NTN4Q9HB63 628 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 EXOSC3Q9NQT5 275 aaKnown RBP7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 ATAD3AQ9NVI7 634 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 SLC25A37Q9NYZ2 338 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 CRNNQ9UBG3 495 aaPredicted RBP7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 TRAPPC4Q9Y296 219 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 SLC9A8Q9Y2E8 581 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 TMED7Q9Y3B3 224 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 FKBP7Q9Y680 259 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 GMEB1Q9Y692 573 aa7.97□□□□□ -1.13
CHMP4A-205ENST00000531158 TMEM129A0AVI4 362 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 B9A039 149 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 LYNX1G3V0Z9 82 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 ZNF208O43345 1280 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 TRMUO75648 421 aaKnown RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 AK1P00568 194 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 IGLV1-44P01699 117 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 GUSBP08236 651 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 GNAO1P09471 354 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 CECR9P0C854 216 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 LYNX1P0DP58 116 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 JUNBP17275 347 aaPredicted RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 HNF1AP20823 631 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 TACR3P29371 465 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 IDH2P48735 452 aaKnown RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 CLK1P49759 484 aaKnown RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 SELENOPP49908 381 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 PPOXP50336 477 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 GZMMP51124 257 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 CDH15P55291 814 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 PRPS1P60891 318 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 NAAAQ02083 359 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 LRRC74AQ0VAA2 488 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 IL18R1Q13478 541 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 RIN1Q13671 783 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 MAPK11Q15759 364 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 IQCCQ4KMZ1 466 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 RBM48Q5RL73 367 aaKnown RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 SAXO2Q658L1 398 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 VHLLQ6RSH7 139 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 PAQR6Q6TCH4 344 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 C16orf62Q7Z3J2 963 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 SLC46A3Q7Z3Q1 461 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 SERPINA11Q86U17 422 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 ANKRD46Q86W74 232 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 OR9K2Q8NGE7 335 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 OR1K1Q8NGR3 316 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 OR10A6Q8NH74 314 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 OR5K1Q8NHB7 308 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 MAGEE2Q8TD90 523 aaPredicted RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 FAM162AQ96A26 154 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 ALKBH3Q96Q83 286 aaPredicted RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 SNX18Q96RF0 628 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 MYOZ1Q9NP98 299 aaPredicted RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 DCAF13Q9NV06 445 aaKnown RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 UPB1Q9UBR1 384 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 TMEFF2Q9UIK5 374 aaPredicted RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 BLOC1S6Q9UL45 172 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 USP22Q9UPT9 525 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 SAMD4AQ9UPU9 718 aaKnown RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 SLC35A3Q9Y2D2 325 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 WDR45Q9Y484 360 aa7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 SPIN1Q9Y657 262 aaPredicted RBP7.96□□□□□ -1.14
CHMP4A-205ENST00000531158 PRKDCP78527 4128 aaKnown RBP7.95□□□□□ -1.14
CHMP4A-205ENST00000531158 LIPT2A6NK58 231 aa7.95□□□□□ -1.14
CHMP4A-205ENST00000531158 AQP7P3A6NL99 342 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms