RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 METTL2AQ96IZ6 378 aaKnown RBP6.89□□□□□ -1.31
CD44-232ENST00000531118 SLC35G5Q96KT7 338 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 OR51B6Q9H340 312 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 C1orf109Q9NX04 203 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 IL20RAQ9UHF4 553 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 BAIAP2L1Q9UHR4 511 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 FBXL3Q9UKT7 428 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 WDR45Q9Y484 360 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 NPTNQ9Y639 398 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 STARD9Q9P2P6 4700 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 IGHV2-70DA0A0C4DH43 119 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 FAAHO00519 579 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 AKAP8O43823 692 aaKnown RBP6.88□□□□□ -1.31
CD44-232ENST00000531118 ZNF500O60304 480 aaPredicted RBP6.88□□□□□ -1.31
CD44-232ENST00000531118 UBL3O95164 117 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 MPIG6BO95866 241 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 MT-ND5P03915 603 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 PNMTP11086 282 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 TCP1P17987 556 aaKnown RBP6.88□□□□□ -1.31
CD44-232ENST00000531118 IMPDH1P20839 514 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 ATP5F1P24539 256 aaPredicted RBP6.88□□□□□ -1.31
CD44-232ENST00000531118 SLC6A9P48067 706 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 ZNF81P51508 661 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 KCNJ10P78508 379 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 PAX2Q02962 417 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 RBBP4Q09028 425 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 EPS8Q12929 822 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 BNIP2Q12982 314 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 TMEM155Q4W5P6 130 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 ESCO2Q56NI9 601 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 PHYHD1Q5SRE7 291 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 BTNL3Q6UXE8 466 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 Q6ZSV7 163 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 ZNF627Q7L945 461 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 NLRC3Q7RTR2 1065 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 RNF130Q86XS8 419 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 MFSD4AQ8N468 514 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 PAQR4Q8N4S7 273 aaPredicted RBP6.88□□□□□ -1.31
CD44-232ENST00000531118 POU5F2Q8N7G0 328 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 PIK3C3Q8NEB9 887 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 OR7A2PQ8NGA2 310 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 OR2T11Q8NH01 316 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 RNF141Q8WVD5 230 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 SSMEM1Q8WWF3 244 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 OR5P2Q8WZ92 322 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 DACT3Q96B18 629 aaPredicted RBP6.88□□□□□ -1.31
CD44-232ENST00000531118 NEURL3Q96EH8 262 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 OR2M2Q96R28 347 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 DENND2DQ9H6A0 471 aaPredicted RBP6.88□□□□□ -1.31
CD44-232ENST00000531118 TNFRSF12AQ9NP84 129 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 B3GAT1Q9P2W7 334 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 ATP6V1HQ9UI12 483 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 LRCH1Q9Y2L9 728 aa6.88□□□□□ -1.31
CD44-232ENST00000531118 HUWE1Q7Z6Z7 4374 aaKnown RBP6.88□□□□□ -1.31
CD44-232ENST00000531118 RNF103-CHMP3A0A140T963 221 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 ZSCAN5BA6NJL1 495 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 FTCDNL1E5RQL4 147 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 K7EIL1 84 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 M0R3G1 203 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 SPRY3O43610 288 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 CRCPO75575 148 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 LCKP06239 509 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 INHBAP08476 426 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 LAMP1P11279 417 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 NEFHP12036 1026 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 ZNF43P17038 809 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 MATN1P21941 496 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 PRKAA2P54646 552 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 RAB1AP62820 205 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 EGR3Q06889 387 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 PMS2P3Q13401 168 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 MFSD13AQ14CX5 517 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 CHI3L2Q15782 390 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 GPR157Q5UAW9 335 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 C1orf140Q5VVS0 124 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 AP1ARQ63HQ0 302 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 LRRN1Q6UXK5 716 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 SLC22A9Q8IVM8 553 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 C1orf174Q8IYL3 243 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 KDM8Q8N371 416 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 Q8N3U1 123 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 KLHL36Q8N4N3 616 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 ICA1LQ8NDH6 482 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 CPEB3Q8NE35 698 aaKnown RBP6.87□□□□□ -1.31
CD44-232ENST00000531118 ZNF519Q8TB69 540 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 FBXO25Q8TCJ0 367 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 GEMIN6Q8WXD5 167 aaKnown RBP6.87□□□□□ -1.31
CD44-232ENST00000531118 MARS2Q96GW9 593 aaKnown RBP6.87□□□□□ -1.31
CD44-232ENST00000531118 FAM71F1Q96KD3 344 aaPredicted RBP6.87□□□□□ -1.31
CD44-232ENST00000531118 PAFAH2Q99487 392 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 PRPF18Q99633 342 aaKnown RBP6.87□□□□□ -1.31
CD44-232ENST00000531118 ERP44Q9BS26 406 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 ASPNQ9BXN1 380 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 OR51I1Q9H343 314 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 TOR3AQ9H497 397 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 C16orf95Q9H693 158 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 POLE3Q9NRF9 147 aa6.87□□□□□ -1.31
CD44-232ENST00000531118 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.87□□□□□ -1.31
CD44-232ENST00000531118 EXD2Q9NVH0 621 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 296.9 ms