RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 ZNF684Q5T5D7 378 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 DHRS7BQ6IAN0 325 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 C14orf80Q86SX3 495 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 CARFQ8N187 725 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 EXD3Q8N9H8 876 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 CLEC1AQ8NC01 280 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 NUP37Q8NFH4 326 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 OR4D10Q8NGI6 311 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 LYSMD1Q96S90 227 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 GPX7Q96SL4 187 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 STACQ99469 402 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 SLC25A21Q9BQT8 299 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 SLC2A11Q9BYW1 496 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 POPDC3Q9HBV1 291 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 LTB4R2Q9NPC1 389 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 INIPQ9NRY2 104 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 OOEPA6NGQ2 149 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 E5RGE8 158 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 RAB29O14966 203 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 UBL3O95164 117 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 FAM87AP0C7U9 286 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 S100A4P26447 101 aaKnown RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 MEOX2P50222 304 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 PPP1CBP62140 327 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 ELOCQ15369 112 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 SF3B4Q15427 424 aaKnown RBP eCLIP6.72□□□□□ -1.331e-7■■■□□ 16.9
CTNND1-229ENST00000531014 ACKR1Q16570 336 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 HYAL4Q2M3T9 481 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 PLEKHS1Q5SXH7 462 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 CPZQ66K79 652 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 TCEAL8Q8IYN2 117 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 LHX4Q969G2 390 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 ARRDC3Q96B67 414 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 RNF39Q9H2S5 420 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 SIRT3Q9NTG7 399 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 GIMAP2Q9UG22 337 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 STYXL1Q9Y6J8 313 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 TMEM218A2RU14 115 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 CTDSP2O14595 271 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 ST8SIA3O43173 380 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 TUSC2O75896 110 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 C1QBP02746 253 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 AHSGP02765 367 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 DRD2P14416 443 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 IL3RAP26951 378 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 HOXD13P35453 343 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 AKR1C3P42330 323 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 EPHA5P54756 1037 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 TAS2R60P59551 318 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 CXCR4P61073 352 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 ILKQ13418 452 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 OR8G2PQ6IF36 304 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 BRAT1Q6PJG6 821 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 ZNF66Q6ZN08 573 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 C19orf47Q8N9M1 422 aaKnown RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 SLC7A6Q92536 515 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 KLK6Q92876 244 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 LMF2Q9BU23 707 aaKnown RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 AMBRA1Q9C0C7 1298 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 OSBPL2Q9H1P3 480 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 ZNF552Q9H707 407 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 KCNK12Q9HB15 430 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 SLC6A20Q9NP91 592 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 ZDHHC18Q9NUE0 388 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 DNMT3BQ9UBC3 853 aaKnown RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 PMS2P1A4D2B8 440 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 HOXC11O43248 304 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 KLRC4O43908 158 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 CRISP2P16562 243 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 B3GNTL1Q67FW5 361 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 ZNF626Q68DY1 528 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 GLIS3Q8NEA6 775 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 MBOAT4Q96T53 435 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 S1PR3Q99500 378 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 SPAG8Q99932 426 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 IKZF5Q9H5V7 419 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 MTHFD2LQ9H903 347 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 GALNT9Q9HCQ5 603 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 ACSS1Q9NUB1 689 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-229ENST00000531014 TAS2R5Q9NYW4 299 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 OR52A1Q9UKL2 312 aa6.72□□□□□ -1.33
CTNND1-229ENST00000531014 CASP8AP2Q9UKL3 1982 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 C2CD4BA6NLJ0 364 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 CXorf49A8MYA2 514 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-229ENST00000531014 SDHDO14521 159 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 CCSO14618 274 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 GIPP09681 153 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-229ENST00000531014 CD37P11049 281 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 ZNF30P17039 623 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 ADRA2CP18825 462 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 SRMP19623 302 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 PLP1P60201 277 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 SPCS3P61009 180 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 HERVK_113P61574 105 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 BTG1P62324 171 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 CSNK1G2P78368 415 aa6.71□□□□□ -1.33
CTNND1-229ENST00000531014 HYAL1Q12794 435 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms