RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 HRASLSQ9HDD0 168 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 FGF21Q9NSA1 209 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 GABARAPH6UMI1 98 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 GABARAPO95166 117 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 CHRNB1P11230 501 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 CDK4P11802 303 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 MTHFD2P13995 350 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 HMGA1P17096 107 aaKnown RBP7.81□□□□□ -1.16
CTNND1-227ENST00000530748 RPL27P61353 136 aaKnown RBP7.81□□□□□ -1.16
CTNND1-227ENST00000530748 TEKQ02763 1124 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 IL10RAQ13651 578 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 SLC46A3Q7Z3Q1 461 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 OR13C9Q8NGT0 318 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 MS4A6EQ96DS6 147 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 C20orf85Q9H1P6 137 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 PDFQ9HBH1 243 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 MYH15Q9Y2K3 1946 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 LRRC30A6NM36 301 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 K7ESM1 405 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 PRICKLE3O43900 615 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-227ENST00000530748 PRAMEF4O60810 478 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 SSTR2P30874 369 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 TRIM23P36406 574 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 CASP3P42574 277 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 RAB5CP51148 216 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 CCR5P51681 352 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 F2RL1P55085 397 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 TLE4Q04727 773 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 GLYR1Q49A26 553 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-227ENST00000530748 KDM4DQ6B0I6 523 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 DCXRQ7Z4W1 244 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 PHYHIPQ92561 330 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 FGGYQ96C11 551 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 LIN37Q96GY3 246 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-227ENST00000530748 CHST8Q9H2A9 424 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 C12orf49Q9H741 205 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 PTTG3PQ9NZH4 202 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 KAT6AQ92794 2004 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 RREB1Q92766 1687 aa7.81□□□□□ -1.16
CTNND1-227ENST00000530748 SLC16A6O15403 523 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 PLRG1O43660 514 aaKnown RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 BLVRBP30043 206 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 HMGN3Q15651 99 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 OVCH1Q7RTY7 1134 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 RBMXL3Q8N7X1 1067 aaKnown RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 ZNF775Q96BV0 537 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 WWTR1Q9GZV5 400 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 C6orf106Q9H6K1 298 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 EXOSC3Q9NQT5 275 aaKnown RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 BIN3Q9NQY0 253 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 TRDV1A0A1B0GX56 115 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 OR7C1O76099 320 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 NXPH2O95156 264 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 UBL3O95164 117 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 SRMP19623 302 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 PMPCAQ10713 525 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 OR52W1Q6IF63 320 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 TMEM207Q6UWW9 146 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 RBMS3Q6XE24 437 aaKnown RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 ZNF813Q6ZN06 617 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 DPPA2Q7Z7J5 298 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 NAA40Q86UY6 237 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 KLHDC8BQ8IXV7 354 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 SLC25A43Q8WUT9 341 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 RBMXL1Q96E39 390 aaKnown RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 POFUT1Q9H488 388 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 TAS2R16Q9NYV7 291 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 MMP17Q9ULZ9 603 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 PPT2Q9UMR5 302 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 ZNF705FA8MVS1 300 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 E9PI62 339 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 ZNF705DP0CH99 300 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 ZNF705BP0CI00 300 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 PIPP12273 146 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 PTBP1P26599 531 aaKnown RBP eCLIP7.8□□□□□ -1.162e-7■■■■□ 23.9
CTNND1-227ENST00000530748 ELAVL1Q15717 326 aaKnown RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 ZNF74Q16587 644 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 PDLIM3Q53GG5 364 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 TMEM71Q6P5X7 295 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 LACC1Q8IV20 430 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 GJC3Q8NFK1 279 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 NAA50Q9GZZ1 169 aaKnown RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 SLCO5A1Q9H2Y9 848 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 HRH4Q9H3N8 390 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 HIF1ANQ9NWT6 349 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 TMEM202A6NGA9 273 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 RGS11O94810 467 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 ABHD16AO95870 558 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 ZNF93P35789 620 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 CLDN12P56749 244 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 SCGB2A2Q13296 93 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 DOK3Q7L591 496 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 CA13Q8N1Q1 262 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 LILRA3Q8N6C8 439 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 OR5M1Q8NGP8 315 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 OR1S2Q8NGQ3 325 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 OLIG1Q8TAK6 271 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 EMG1Q92979 244 aaKnown RBP7.8□□□□□ -1.16
CTNND1-227ENST00000530748 LRFN5Q96NI6 719 aa7.8□□□□□ -1.16
CTNND1-227ENST00000530748 ABHD6Q9BV23 337 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms