RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 NFKBIDQ8NI38 313 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 FGFBP3Q8TAT2 258 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 RNF217Q8TC41 542 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 ZMYND19Q96E35 227 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-219ENST00000530495 OR52B2Q96RD2 323 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 TMEM43Q9BTV4 400 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 TMEM27Q9HBJ8 222 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 G6PC2Q9NQR9 355 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 SLC25A37Q9NYZ2 338 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 SELENONQ9NZV5 590 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 GMEB1Q9Y692 573 aa12.77□□□□□ -0.37
CAPN1-219ENST00000530495 A0A1W2PPW3 197 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 C17orf100A8MU93 164 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 TPST2O60704 377 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 PNPP00491 289 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 MT-ATP6P00846 226 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 AVPP01185 164 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 PATE4P0C8F1 98 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 ARAFP10398 606 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 AHCYP23526 432 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 LSP1P33241 339 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 MAGEB1P43366 347 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 ARFIP2P53365 341 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 CDH12P55289 794 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 CDK6Q00534 326 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 LRIF1Q5T3J3 769 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 ACSM5Q6NUN0 579 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 LINC00114Q6XXX2 140 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 WDR88Q6ZMY6 472 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 SLC22A24Q8N4F4 322 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 GOLGA6L1Q8N7Z2 621 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 TMEM54Q969K7 222 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 GPR160Q9UJ42 338 aa12.76□□□□□ -0.37
CAPN1-219ENST00000530495 IGLV3-9A0A075B6K5 115 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 SLC22A23A1A5C7 686 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 PRORSD1PA6NEY8 169 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 LRRN3E7EW58 273 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 ENTPD5O75356 428 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 RGS9O75916 674 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-219ENST00000530495 OR8G3PP0DMU2 310 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 ZNF250P15622 560 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 EPHA1P21709 976 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 CRYBB2P43320 205 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 CSNK1A1P48729 337 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 BIDP55957 195 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 RGS8P57771 180 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-219ENST00000530495 SELENOVP59797 346 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 NCALDP61601 193 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 NKPD1Q17RQ9 610 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 PCGF3Q3KNV8 242 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 GCNT6Q5T4J0 391 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
CAPN1-219ENST00000530495 RGS7BPQ6MZT1 257 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-219ENST00000530495 LRFN4Q6PJG9 635 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 THSD4Q6ZMP0 1018 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 CROCCP2Q86T23 111 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 MSRB3Q8IXL7 192 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 C10orf111Q8N326 155 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 C10orf53Q8N6V4 93 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 BHLHE22Q8NFJ8 381 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-219ENST00000530495 OR6X1Q8NH79 312 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-219ENST00000530495 JMJD8Q96S16 334 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 WFDC6Q9BQY6 131 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 RBM4Q9BWF3 364 aaKnown RBP12.75□□□□□ -0.37
CAPN1-219ENST00000530495 ZNF665Q9H7R5 613 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 EVA1AQ9H8M9 152 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 SLC52A3Q9NQ40 469 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 HINT3Q9NQE9 182 aaKnown RBP12.75□□□□□ -0.37
CAPN1-219ENST00000530495 NKIRAS2Q9NYR9 191 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 GLTPQ9NZD2 209 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 TAAR3PQ9P1P4 343 aa12.75□□□□□ -0.37
CAPN1-219ENST00000530495 LOC105371242A0A075B767 164 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 TMEM120BA0PK00 339 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 PLPP2O43688 288 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 CDC14BO60729 498 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 SERPINB7O75635 380 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 MPZL1O95297 269 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 CLPTM1O96005 669 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 ADORA3P0DMS8 318 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 PPIBP23284 216 aaKnown RBP12.74□□□□□ -0.37
CAPN1-219ENST00000530495 LIMS1P48059 325 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 MRPL19P49406 292 aaKnown RBP12.74□□□□□ -0.37
CAPN1-219ENST00000530495 SLC18A1P54219 525 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 CCL8P80075 99 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 ZP4Q12836 540 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 ALKBH6Q3KRA9 238 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 TMEM154Q6P9G4 183 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 PAQR4Q8N4S7 273 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-219ENST00000530495 SLC30A7Q8NEW0 376 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 OR5J2Q8NH18 312 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 ZNF519Q8TB69 540 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 SYNPRQ8TBG9 265 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 ZBTB9Q96C00 473 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 ZNF607Q96SK3 696 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 TMPRSS13Q9BYE2 586 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 PARD6BQ9BYG5 372 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 TMEM38AQ9H6F2 299 aa12.74□□□□□ -0.37
CAPN1-219ENST00000530495 TMEM38BQ9NVV0 291 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms