RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 SNAPINO95295 136 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 CSRP1P21291 193 aaKnown RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 PEBP1P30086 187 aaKnown RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 KCNJ3P48549 501 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 DHRS2Q13268 280 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 ZNF234Q14588 700 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 DHCR24Q15392 516 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 DEFB134Q4QY38 66 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 AVPI1Q5T686 147 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 FHL5Q5TD97 284 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 TMEM205Q6UW68 189 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 ANKRD33Q7Z3H0 272 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 ZAR1Q86SH2 424 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 RBM18Q96H35 190 aaKnown RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 IKZF2Q9UKS7 526 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 A0A1B0GTH9 108 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 IGLON5A6NGN9 336 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 FADS1O60427 444 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 LILRB3O75022 631 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 ZNF432O94892 652 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 AMY2AP04746 511 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 CASRP41180 1078 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 SNRPNP63162 240 aaKnown RBP13.34□□□□□ -0.27
CAPN1-214ENST00000528165 DCDP81605 110 aaKnown RBP13.34□□□□□ -0.27
CAPN1-214ENST00000528165 EXOSC7Q15024 291 aaKnown RBP13.34□□□□□ -0.27
CAPN1-214ENST00000528165 ODF4Q2M2E3 257 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 VWA2Q5GFL6 755 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 LINC01590Q5TEZ4 76 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 LEG1Q6P5S2 330 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 TMEM71Q6P5X7 295 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 SLC16A9Q7RTY1 509 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 VN1R4Q7Z5H5 301 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 C12orf40Q86WS4 652 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 GTPBP8Q8N3Z3 284 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-214ENST00000528165 INO80EQ8NBZ0 244 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-214ENST00000528165 PPP1R1CQ8WVI7 109 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 ATG5Q9H1Y0 275 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 ZFP57Q9NU63 452 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 M0QYG6 137 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 CCSO14618 274 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 ARPC3O15145 178 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 P2RY2P41231 377 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 ACAA2P42765 397 aaKnown RBP13.34□□□□□ -0.27
CAPN1-214ENST00000528165 EMDP50402 254 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 ARHGAP40Q5TG30 622 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 ZNF425Q6IV72 752 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 ULK3Q6PHR2 472 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 FAM122BQ7Z309 247 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 GPR148Q8TDV2 347 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 GPX8Q8TED1 209 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 PMM1Q92871 262 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 LMAN2LQ9H0V9 348 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 KCNK15Q9H427 330 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 KLHDC2Q9Y2U9 406 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 HCFC2Q9Y5Z7 792 aa13.34□□□□□ -0.27
CAPN1-214ENST00000528165 PQBP1O60828 265 aaKnown RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 LDB3O75112 727 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 HLA-AP01891 365 aaKnown RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 CRYBA1P05813 215 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 GLAP06280 429 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 SLC35G6P0C7Q6 338 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 NR0B1P51843 470 aaKnown RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 CAPZA1P52907 286 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 ATP1B3P54709 279 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 SRSF4Q08170 494 aaKnown RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 MESP2Q0VG99 397 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 SREBF2Q12772 1141 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 IGSF11Q5DX21 431 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 LILRA6Q6PI73 481 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 UNQ6126/PRO20091Q6UXV3 157 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 SLC39A5Q6ZMH5 540 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 ZFP82Q8N141 532 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 OR10AC1Q8NH08 325 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 DNAJB12Q9NXW2 375 aaKnown RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF346Q9UL40 294 aaKnown RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 CARHSP1Q9Y2V2 147 aaKnown RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 TRBV5-7A0A0A0MS05 114 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 PRRT4C9JH25 899 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 B3GALT2O43825 422 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 CXCL10P02778 98 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 ADH5P11766 374 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 RUNX2Q13950 521 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 KCNAB1Q14722 419 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 RAB11BQ15907 218 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 C2orf76Q3KRA6 126 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 TCEAL5Q5H9L2 206 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 EXOSC6Q5RKV6 272 aaKnown RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 ATPAF1Q5TC12 328 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 PRAMEF17Q5VTA0 474 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 C3orf33Q6P1S2 294 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 BIVMQ86UB2 503 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 JAZF1Q86VZ6 243 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF595Q8IYB9 648 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 OR51A4Q8NGJ6 313 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 PAQR8Q8TEZ7 354 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 ARL11Q969Q4 196 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 FAM3DQ96BQ1 224 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 ZBTB8AQ96BR9 441 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 SERINC2Q96SA4 455 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms