RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 DPY19L4Q7Z388 723 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 SIAH3Q8IW03 269 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 OR2G2Q8NGZ5 317 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 ASB17Q8WXJ9 295 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 SCMH1Q96GD3 660 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 GFM1Q96RP9 751 aaKnown RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 ELF4Q99607 663 aaPredicted RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 SMAD5Q99717 465 aaKnown RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 NUDT22Q9BRQ3 303 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 TMEM246Q9BRR3 403 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 GTPBP2Q9BX10 602 aaKnown RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 TSPAN10Q9H1Z9 355 aaPredicted RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 VSX1Q9NZR4 365 aaPredicted RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 ETV7Q9Y603 341 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 ADAMTS9Q9P2N4 1935 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 OR4C45A6NMZ5 311 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 CXCL12P48061 93 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 MRPS10P82664 201 aaKnown RBP13.87□□□□□ -0.19
USH1C-207ENST00000527720 ACY1Q03154 408 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 TNK1Q13470 666 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 KLF9Q13886 244 aaPredicted RBP13.87□□□□□ -0.19
USH1C-207ENST00000527720 C1QL3Q5VWW1 255 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 PTCRAQ6ISU1 281 aaPredicted RBP13.87□□□□□ -0.19
USH1C-207ENST00000527720 LRRN1Q6UXK5 716 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 ZNF433Q8N7K0 673 aaPredicted RBP13.87□□□□□ -0.19
USH1C-207ENST00000527720 ZNF417Q8TAU3 575 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 STT3BQ8TCJ2 826 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 C15orf40Q8WUR7 153 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 TMEM234Q8WY98 164 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 NSMAFQ92636 917 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 CCDC74AQ96AQ1 378 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 SLC25A36Q96CQ1 311 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 SLC7A5P2Q9GIP4 190 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 LIN7BQ9HAP6 207 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 GALNT9Q9HCQ5 603 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 B9D1Q9UPM9 204 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 PRUNE2Q8WUY3 3088 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 TRBV5-7A0A0A0MS05 114 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 TRABD2BA6NFA1 517 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 C11orf98E9PRG8 122 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 K7ESF4 209 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 AGRPO00253 132 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 AHSA1O95433 338 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 ECDO95905 644 aaPredicted RBP13.87□□□□□ -0.19
USH1C-207ENST00000527720 ANKRD34CP0C6C1 535 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 ACKR1Q16570 336 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 PLCZ1Q86YW0 608 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 ZFAND1Q8TCF1 268 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 THEM6Q8WUY1 208 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 HLA-CQ95604 372 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 SLC25A38Q96DW6 304 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 DCBLD2Q96PD2 775 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 ACTR6Q9GZN1 396 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 SLC22A11Q9NSA0 550 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 NUDT15Q9NV35 164 aa13.87□□□□□ -0.19
USH1C-207ENST00000527720 CACNA1EQ15878 2313 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 A0A0A6YYJ9 748 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 GABARAPH6UMI1 98 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 OR6A2O95222 327 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 TCEA1P23193 301 aaKnown RBP13.86□□□□□ -0.19
USH1C-207ENST00000527720 MNDAP41218 407 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 SUMO3P55854 103 aaPredicted RBP13.86□□□□□ -0.19
USH1C-207ENST00000527720 SHBQ15464 509 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 CCDC92Q53HC0 331 aaPredicted RBP13.86□□□□□ -0.19
USH1C-207ENST00000527720 CHRDL2Q6WN34 429 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 ESPNLQ6ZVH7 1005 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 UTS2BQ765I0 119 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 SLC7A5P1Q8MH63 180 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 GPR148Q8TDV2 347 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 DUSP19Q8WTR2 217 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 ST8SIA1Q92185 356 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 ORAI1Q96D31 301 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 S100A16Q96FQ6 103 aaKnown RBP13.86□□□□□ -0.19
USH1C-207ENST00000527720 OR8B4Q96RC9 309 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 DUSP23Q9BVJ7 150 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 CACNG6Q9BXT2 260 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 PRO3102Q9H379 93 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 GHITMQ9H3K2 345 aa13.86□□□□□ -0.19
USH1C-207ENST00000527720 MRPL39Q9NYK5 338 aaKnown RBP13.86□□□□□ -0.19
USH1C-207ENST00000527720 PPIEQ9UNP9 301 aaKnown RBP13.86□□□□□ -0.19
USH1C-207ENST00000527720 C17orf51A8MQB3 221 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 PLPP3O14495 311 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 ADAM10O14672 748 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 MYF5P13349 255 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 GDNFP39905 211 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 CCR9P51686 369 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 SNTB2Q13425 540 aaKnown RBP13.85□□□□□ -0.19
USH1C-207ENST00000527720 BCL2L15Q5TBC7 163 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 PWWP2BQ6NUJ5 590 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 FCRLAQ7L513 359 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 LRRTM1Q86UE6 522 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 ZNF676Q8N7Q3 588 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 NUBPLQ8TB37 319 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 OR2M2Q96R28 347 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 GON7Q9BXV9 100 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 MED28Q9H204 178 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 NAP1L6A6NFF2 107 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 ANKUB1A6NFN9 424 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 CENPBD1B2RD01 187 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 LDOC1O95751 146 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms