RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 NFATC2Q13469 925 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ZNF528Q3MIS6 628 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 MANEAQ5SRI9 462 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ZNF684Q5T5D7 378 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 DHRS7BQ6IAN0 325 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 C14orf80Q86SX3 495 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 CARFQ8N187 725 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 EXD3Q8N9H8 876 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 CLEC1AQ8NC01 280 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 NUP37Q8NFH4 326 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 OR4D10Q8NGI6 311 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 LYSMD1Q96S90 227 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 GPX7Q96SL4 187 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 STACQ99469 402 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 SLC25A21Q9BQT8 299 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 SLC2A11Q9BYW1 496 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 POPDC3Q9HBV1 291 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 LTB4R2Q9NPC1 389 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 INIPQ9NRY2 104 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 OOEPA6NGQ2 149 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 E5RGE8 158 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 RAB29O14966 203 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 UBL3O95164 117 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 FAM87AP0C7U9 286 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 S100A4P26447 101 aaKnown RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 MEOX2P50222 304 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 PPP1CBP62140 327 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ELOCQ15369 112 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 SF3B4Q15427 424 aaKnown RBP eCLIP6.72□□□□□ -1.331e-7■■■□□ 16.9
CTNND1-216ENST00000527467 ACKR1Q16570 336 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 HYAL4Q2M3T9 481 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 PLEKHS1Q5SXH7 462 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 CPZQ66K79 652 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 TCEAL8Q8IYN2 117 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 LHX4Q969G2 390 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ARRDC3Q96B67 414 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 RNF39Q9H2S5 420 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 SIRT3Q9NTG7 399 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 GIMAP2Q9UG22 337 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 STYXL1Q9Y6J8 313 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 TMEM218A2RU14 115 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 CTDSP2O14595 271 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ST8SIA3O43173 380 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 TUSC2O75896 110 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 C1QBP02746 253 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 AHSGP02765 367 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 DRD2P14416 443 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 IL3RAP26951 378 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 HOXD13P35453 343 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 AKR1C3P42330 323 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 EPHA5P54756 1037 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 TAS2R60P59551 318 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 CXCR4P61073 352 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ILKQ13418 452 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 OR8G2PQ6IF36 304 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 BRAT1Q6PJG6 821 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ZNF66Q6ZN08 573 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 C19orf47Q8N9M1 422 aaKnown RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 SLC7A6Q92536 515 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 KLK6Q92876 244 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 LMF2Q9BU23 707 aaKnown RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 AMBRA1Q9C0C7 1298 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 OSBPL2Q9H1P3 480 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ZNF552Q9H707 407 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 KCNK12Q9HB15 430 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 SLC6A20Q9NP91 592 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ZDHHC18Q9NUE0 388 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 DNMT3BQ9UBC3 853 aaKnown RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 PMS2P1A4D2B8 440 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 HOXC11O43248 304 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 KLRC4O43908 158 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 CRISP2P16562 243 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 B3GNTL1Q67FW5 361 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ZNF626Q68DY1 528 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 GLIS3Q8NEA6 775 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 MBOAT4Q96T53 435 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 S1PR3Q99500 378 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 SPAG8Q99932 426 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 IKZF5Q9H5V7 419 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 MTHFD2LQ9H903 347 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 GALNT9Q9HCQ5 603 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 ACSS1Q9NUB1 689 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-216ENST00000527467 TAS2R5Q9NYW4 299 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 OR52A1Q9UKL2 312 aa6.72□□□□□ -1.33
CTNND1-216ENST00000527467 CASP8AP2Q9UKL3 1982 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 C2CD4BA6NLJ0 364 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 CXorf49A8MYA2 514 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-216ENST00000527467 SDHDO14521 159 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 CCSO14618 274 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 GIPP09681 153 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-216ENST00000527467 CD37P11049 281 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 ZNF30P17039 623 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 ADRA2CP18825 462 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 SRMP19623 302 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 PLP1P60201 277 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 SPCS3P61009 180 aa6.71□□□□□ -1.33
CTNND1-216ENST00000527467 HERVK_113P61574 105 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms