RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ZNF519Q8TB69 540 aa15.89■□□□□ 0.13
USH1C-205ENST00000527020 GON7Q9BXV9 100 aa15.89■□□□□ 0.13
USH1C-205ENST00000527020 NDEL1Q9GZM8 345 aa15.89■□□□□ 0.13
USH1C-205ENST00000527020 COPZ2Q9P299 210 aa15.89■□□□□ 0.13
USH1C-205ENST00000527020 COPS7AQ9UBW8 275 aa15.89■□□□□ 0.13
USH1C-205ENST00000527020 KCNG2Q9UJ96 466 aa15.89■□□□□ 0.13
USH1C-205ENST00000527020 TRBV5-7A0A0A0MS05 114 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 TMEM127O75204 238 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 GLB1P16278 677 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 SNTB2Q13425 540 aaKnown RBP15.88■□□□□ 0.13
USH1C-205ENST00000527020 SGCBQ16585 318 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 GSG1Q2KHT4 349 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 BTBD16Q32M84 506 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 TMEM255AQ5JRV8 349 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 PRSS42Q7Z5A4 293 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 ADGRG3Q86Y34 549 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 DNAAF1Q8NEP3 725 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 OR51A4Q8NGJ6 313 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 OR52I2Q8NH67 350 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 GPR119Q8TDV5 335 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 SLC25A36Q96CQ1 311 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 MNTQ99583 582 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 SLC22A11Q9NSA0 550 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 FOXJ3Q9UPW0 622 aa15.88■□□□□ 0.13
USH1C-205ENST00000527020 TRAV8-7A0A075B6U6 113 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 TMED7-TICAM2A0A0A6YYA0 188 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 CENPBD1B2RD01 187 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 SUSD5O60279 629 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 ZNF780AO75290 641 aaPredicted RBP15.87■□□□□ 0.13
USH1C-205ENST00000527020 ZNF254O75437 659 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 PLGP00747 810 aaPredicted RBP15.87■□□□□ 0.13
USH1C-205ENST00000527020 KIR3DL2P43630 455 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 CBFBQ13951 182 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 SLC22A10Q63ZE4 541 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 BTN2A1Q7KYR7 527 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 COX15Q7KZN9 410 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 MAMDC2Q7Z304 686 aaPredicted RBP15.87■□□□□ 0.13
USH1C-205ENST00000527020 OTOSQ8NHW6 89 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 THEM6Q8WUY1 208 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 ATOH1Q92858 354 aaPredicted RBP15.87■□□□□ 0.13
USH1C-205ENST00000527020 MS4A3Q96HJ5 214 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 OR2M2Q96R28 347 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 OR51J1Q9H342 316 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 TCF7L1Q9HCS4 588 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 MRPL15Q9P015 296 aaKnown RBP15.87■□□□□ 0.13
USH1C-205ENST00000527020 RABL2AQ9UBK7 228 aaPredicted RBP15.87■□□□□ 0.13
USH1C-205ENST00000527020 RABL2BQ9UNT1 228 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 TMED7Q9Y3B3 224 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 ZNF593O00488 134 aaPredicted RBP15.87■□□□□ 0.13
USH1C-205ENST00000527020 FABP7O15540 132 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 GMDSO60547 372 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 MT-ATP6P00846 226 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 CALCBP10092 127 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 STOMP27105 288 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 MAPK3P27361 379 aaPredicted RBP15.87■□□□□ 0.13
USH1C-205ENST00000527020 P2RX1P51575 399 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 SNRPD2P62316 118 aaKnown RBP15.87■□□□□ 0.13
USH1C-205ENST00000527020 ACKR1Q16570 336 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 SHISA6Q6ZSJ9 500 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 SYNPRQ8TBG9 265 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 DEDD2Q8WXF8 326 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 NSMAFQ92636 917 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 FOXN4Q96NZ1 517 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 MESP1Q9BRJ9 268 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 NUDT22Q9BRQ3 303 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 FGF21Q9NSA1 209 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 B9D1Q9UPM9 204 aa15.87■□□□□ 0.13
USH1C-205ENST00000527020 PRSS37A4D1T9 235 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 OR6C76A6NM76 312 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 SLC25A12O75746 678 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 H2AFB2P0C5Z0 115 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 CXCL3P19876 107 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 CSRP1P21291 193 aaKnown RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 POLR2HP52434 150 aaKnown RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 RAG2P55895 527 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 RPL27P61353 136 aaKnown RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 INSM1Q01101 510 aaPredicted RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 GALK2Q01415 458 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 CD276Q5ZPR3 534 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 C16orf47Q6ZP98 133 aaPredicted RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 DND1Q8IYX4 353 aaKnown RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 PLPP5Q8NEB5 264 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 METTL21AQ8WXB1 218 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 DNASE2BQ8WZ79 361 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 C4orf45Q96LM5 186 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 ULBP3Q9BZM4 244 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 MRPL22Q9NWU5 206 aaKnown RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 RCE1Q9Y256 329 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 MRPS17Q9Y2R5 130 aaKnown RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 TMEM14AQ9Y6G1 99 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 FREM3P0C091 2139 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 TNRC18O15417 2968 aaPredicted RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 IGHV3-20A0A0C4DH32 117 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 ANKRD34BA5PLL1 514 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 H3BSH0 61 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 GABARAPH6UMI1 98 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 DXOO77932 396 aaKnown RBP15.86■□□□□ 0.13
USH1C-205ENST00000527020 SYPP08247 313 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 PTHLHP12272 177 aa15.86■□□□□ 0.13
USH1C-205ENST00000527020 CCR9P51686 369 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms