RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 MN1Q10571 1320 aaPredicted RBP2.45□□□□□ -2.02
CD44-215ENST00000525241 LRP4O75096 1905 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 IGKV6-21A0A0C4DH24 114 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 ZNF726A6NNF4 738 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 GOLGA8SH3BPF8 625 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 C1orf105O95561 183 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 UBTFL1P0CB47 393 aaPredicted RBP2.45□□□□□ -2.02
CD44-215ENST00000525241 VHLP40337 213 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 HNMTP50135 292 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 CCR8P51685 355 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 GBX2P52951 348 aaPredicted RBP2.45□□□□□ -2.02
CD44-215ENST00000525241 ARFIP1P53367 373 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 AIF1P55008 147 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 IL24Q13007 206 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 KCTD21Q4G0X4 260 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 PUSL1Q8N0Z8 303 aaKnown RBP2.45□□□□□ -2.02
CD44-215ENST00000525241 C15orf56Q8N910 161 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 SDR42E1Q8WUS8 393 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 MED8Q96G25 268 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 WFIKKN1Q96NZ8 548 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 TSSK3Q96PN8 268 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 RARRES2Q99969 163 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 RSPO3Q9BXY4 272 aaPredicted RBP2.45□□□□□ -2.02
CD44-215ENST00000525241 MFFQ9GZY8 342 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 NOX3Q9HBY0 568 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 OPN4Q9UHM6 478 aa2.45□□□□□ -2.02
CD44-215ENST00000525241 A0A1W2PPE3 182 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 A0A1W2PPV9 198 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 TMEM150BA6NC51 233 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 PCP4L1A6NKN8 68 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 GPR89AB7ZAQ6 455 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 H0YHG0 523 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 CCL21O00585 134 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 ENTPD5O75356 428 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 IL1BP01584 269 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 GAPDHP04406 335 aaKnown RBP2.44□□□□□ -2.02
CD44-215ENST00000525241 MRPL3P09001 348 aaKnown RBP2.44□□□□□ -2.02
CD44-215ENST00000525241 GPR89BP0CG08 455 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 RORAP35398 523 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 HSD17B2P37059 387 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 CEBPDP49716 269 aaPredicted RBP2.44□□□□□ -2.02
CD44-215ENST00000525241 SEC61GP60059 68 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 SLC7A9P82251 487 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 CHIT1Q13231 466 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 PPIL2Q13356 520 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 UBE2SQ16763 222 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 ANKDD1AQ495B1 522 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 LRRC23Q53EV4 343 aaPredicted RBP2.44□□□□□ -2.02
CD44-215ENST00000525241 STRADAQ7RTN6 431 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 EFL1Q7Z2Z2 1120 aaKnown RBP2.44□□□□□ -2.02
CD44-215ENST00000525241 ZNF679Q8IYX0 411 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 STPG2Q8N412 459 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 OR2L8Q8NGY9 312 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 PLEKHA8Q96JA3 519 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 C12orf42Q96LP6 360 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 NPY6RQ99463 290 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 CRACR2AQ9BSW2 395 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 OSBPL10Q9BXB5 764 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 OR12D3Q9UGF7 316 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 CD84Q9UIB8 345 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 ZNF639Q9UID6 485 aa2.44□□□□□ -2.02
CD44-215ENST00000525241 YTHDF2Q9Y5A9 579 aaKnown RBP2.44□□□□□ -2.02
CD44-215ENST00000525241 IGHV3-66A0A0C4DH42 116 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 A0A1W2PQ67 120 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 CLRN2A0PK11 232 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 HAS3O00219 553 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 CTDNEP1O95476 244 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 ATP5C1P36542 298 aaKnown RBP2.43□□□□□ -2.02
CD44-215ENST00000525241 ACTA2P62736 377 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 ACTC1P68032 377 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 ARHGAP19Q14CB8 494 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 C5orf47Q569G3 176 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 LY6G6FQ5SQ64 297 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 VAX1Q5SQQ9 334 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 C19orf35Q6ZS72 473 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 SLC25A48Q6ZT89 311 aaKnown RBP2.43□□□□□ -2.02
CD44-215ENST00000525241 FAM92BQ6ZTR7 304 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 H2BFWTQ7Z2G1 175 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 LHFPL3Q86UP9 236 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 OR2G2Q8NGZ5 317 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 HSFY1Q96LI6 401 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 CCT7Q99832 543 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 SH3GL1Q99961 368 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 CHAC1Q9BUX1 264 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 TMEM59Q9BXS4 323 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 GON7Q9BXV9 100 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 LINC00597Q9H2U6 94 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 ZNF430Q9H8G1 570 aaPredicted RBP2.43□□□□□ -2.02
CD44-215ENST00000525241 PEX16Q9Y5Y5 336 aa2.43□□□□□ -2.02
CD44-215ENST00000525241 IGSF9BQ9UPX0 1349 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 IGHV5-51A0A0C4DH38 117 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 A0A1B0GVX0 72 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 FOXE1O00358 373 aaPredicted RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 SURF6O75683 361 aaKnown RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 C6orf47O95873 294 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 C2P06681 752 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 ATP1B2P14415 290 aaPredicted RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 ETS2P15036 469 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 SSR1P43307 286 aaKnown RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 RFX3P48380 749 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms