RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SLC22A25Q6T423 547 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 PAMR1Q6UXH9 720 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF813Q6ZN06 617 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 DPPA2Q7Z7J5 298 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 IGFN1Q86VF2 1251 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 LSRQ86X29 649 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 MEX3DQ86XN8 651 aaKnown RBP4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 C10orf67Q8IYJ2 551 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 SYT14Q8NB59 555 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR2T29Q8NH02 315 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 MOSPD2Q8NHP6 518 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 MAGEE2Q8TD90 523 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 GNPDA2Q8TDQ7 276 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ASB10Q8WXI3 467 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 NINJ1Q92982 152 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC7A6OSQ96CW6 309 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 TXNDC15Q96J42 360 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF570Q96NI8 536 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 RBP7Q96R05 134 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 CCL19Q99731 98 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 FOXB1Q99853 325 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ALG12Q9BV10 488 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 KATNB1Q9BVA0 655 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 LRMDAQ9H2I8 198 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF556Q9HAH1 456 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 SMURF2Q9HAU4 748 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 GLTPQ9NZD2 209 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 POMPQ9Y244 141 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC25A15Q9Y619 301 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ASH1LQ9NR48 2969 aaKnown RBP4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 A0A1W2PPL8 197 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 A0A1W2PR80 420 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 FAM221AA4D161 298 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 VSTM5A8MXK1 200 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 CDC42EP2O14613 210 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 ABCD4O14678 606 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 HS3ST1O14792 307 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 ARHGEF9O43307 516 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 DHHO43323 396 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 KLF4O43474 513 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 AHCYL1O43865 530 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 MGRN1O60291 552 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 DEAF1O75398 565 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 TRMUO75648 421 aaKnown RBP4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 SEC14L2O76054 403 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 RENP00797 406 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 PTHP01270 115 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR8G3PP0DMU2 310 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 CD79AP11912 226 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 FCGR1AP12314 374 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 BMP4P12644 408 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 B4GALT1P15291 398 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 NPR2P20594 1047 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 GSTM3P21266 225 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 CD40P25942 277 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 SDHAP31040 664 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 ARR3P36575 388 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 OMPP47874 163 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 LIMS1P48059 325 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 CDH11P55287 796 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 ERVK-25P63136 954 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 CBX1P83916 185 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 PLP2Q04941 152 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 NPRL3Q12980 569 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 TSPAN31Q12999 210 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 KRR1Q13601 381 aaKnown RBP4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 LAPTM4AQ15012 233 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 SEC23BQ15437 767 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 MICAQ29983 383 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 GSG1Q2KHT4 349 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 C3orf36Q3SXR2 165 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC36A2Q495M3 483 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 NRN1LQ496H8 165 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 THEM4Q5T1C6 240 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 NCMAPQ5T1S8 102 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 ARMC4Q5T2S8 1044 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 ADAM5Q6NVV9 412 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 TMEM53Q6P2H8 277 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 PGM2L1Q6PCE3 622 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 DPY19L2P2Q6ZN68 376 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 LINGO2Q7L985 606 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 TSEN54Q7Z6J9 526 aaKnown RBP4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 ADCK1Q86TW2 530 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 JAZF1Q86VZ6 243 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 ADGRG5Q8IZF4 528 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 ARIH2OSQ8N7S6 290 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 FAM169BQ8N8A8 192 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 AQP11Q8NBQ7 271 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 GIPC3Q8TF64 312 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 CANT1Q8WVQ1 401 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 BCL2L2Q92843 193 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 TMEM54Q969K7 222 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 PIGTQ969N2 578 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 FBXW5Q969U6 566 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 BOD1Q96IK1 185 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC38A2Q96QD8 506 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 RAB3IPQ96QF0 476 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 HS3ST6Q96QI5 342 aa4.73□□□□□ -1.65
HMGB1P40-201ENST00000525121 TNFRSF13CQ96RJ3 184 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms