RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 THOC1Q96FV9 657 aaKnown RBP16.17■□□□□ 0.18
PTP4A3-206ENST00000524028 ZNF385DQ9H6B1 395 aa16.17■□□□□ 0.18
PTP4A3-206ENST00000524028 LEF1Q9UJU2 399 aaPredicted RBP16.17■□□□□ 0.18
PTP4A3-206ENST00000524028 SYNGR3O43761 229 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 CH25HO95992 272 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 C8BP07358 591 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 HNF1AP20823 631 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 APEX1P27695 318 aaKnown RBP16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 GLRXP35754 106 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 CSNK1A1P48729 337 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 EVX1P49640 407 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 RBBP4Q09028 425 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 RAB39AQ14964 217 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 ZNF74Q16587 644 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 CYP51A1Q16850 503 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 TRMT5Q32P41 509 aaKnown RBP16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 ELFN2Q5R3F8 820 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 DPP10Q8N608 796 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 VANGL1Q8TAA9 524 aaPredicted RBP16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 HPS1Q92902 700 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 CGREF1Q99674 301 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 SYT3Q9BQG1 590 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 C19orf24Q9BVV8 132 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 MYEF2Q9P2K5 600 aaKnown RBP16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 REV1Q9UBZ9 1251 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 FZR1Q9UM11 496 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 NDUFAF1Q9Y375 327 aa16.16■□□□□ 0.18
PTP4A3-206ENST00000524028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.16■□□□□ 0.189e-7■■■□□ 16.3
PTP4A3-206ENST00000524028 RAB36O95755 333 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 TCN1P20061 433 aaPredicted RBP16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 CD247P20963 164 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 ALDH3B1P43353 468 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 SEC24CP53992 1094 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 ZP4Q12836 540 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 MAD2L1BPQ15013 274 aaPredicted RBP16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 LRFN4Q6PJG9 635 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 SLC35D2Q76EJ3 337 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 CARM1Q86X55 608 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 SNX32Q86XE0 403 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 OR6X1Q8NH79 312 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 ADAMTS16Q8TE57 1224 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 C1orf159Q96HA4 380 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 RABEP2Q9H5N1 569 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 DENND2DQ9H6A0 471 aaPredicted RBP16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 KAT8Q9H7Z6 458 aaKnown RBP16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 GLTPQ9NZD2 209 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 SLC7A7Q9UM01 511 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 SPEF1Q9Y4P9 236 aa16.15■□□□□ 0.18
PTP4A3-206ENST00000524028 M0R233 179 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 UBL3O95164 117 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 OR6A2O95222 327 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 HPXP02790 462 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 COL8A2P25067 703 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 CRYBA2P53672 197 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 CDH15P55291 814 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 MELKQ14680 651 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 GKAP1Q5VSY0 366 aaPredicted RBP16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 TTC33Q6PID6 262 aaPredicted RBP16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 PIWIL3Q7Z3Z3 882 aaKnown RBP16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 SLC22A24Q8N4F4 322 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 LINC01356Q8N9X3 169 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 DYDC1Q8WWB3 177 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 TAMM41Q96BW9 452 aa16.14■□□□□ 0.17
PTP4A3-206ENST00000524028 TRAPPC13A5PLN9 417 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 KPNA4O00629 521 aaPredicted RBP16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 SERPINA5P05154 406 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 GZMMP51124 257 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 CCNIQ14094 377 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 STON2Q8WXE9 905 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 SLC25A44Q96H78 314 aaPredicted RBP16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 SH3GL3Q99963 347 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 PRSS27Q9BQR3 290 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 ZNF426Q9BUY5 554 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 MS4A5Q9H3V2 200 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 NANSQ9NR45 359 aa16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 TMEFF2Q9UIK5 374 aaPredicted RBP16.13■□□□□ 0.17
PTP4A3-206ENST00000524028 ANGPT2O15123 496 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 RNF13O43567 381 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 ASAH2BP0C7U1 165 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 PGA4P0DJD7 388 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 PGA3P0DJD8 388 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 PCGF2P35227 344 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 GALK2Q01415 458 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 NFYCQ13952 458 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 PATL1Q86TB9 770 aaKnown RBP16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 PAQR4Q8N4S7 273 aaPredicted RBP16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 OR10A6Q8NH74 314 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 ZNF566Q969W8 418 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 PCDHAC1Q9H158 963 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 MEPEQ9NQ76 525 aaPredicted RBP16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 INTS9Q9NV88 658 aaKnown RBP16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 TMEM38BQ9NVV0 291 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 ZNF229Q9UJW7 825 aa16.12■□□□□ 0.17
PTP4A3-206ENST00000524028 WNT9BO14905 357 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 DHHO43323 396 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 QDPRP09417 244 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 OR8G3PP0DMU2 310 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 NAT2P11245 290 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 CCL2P13500 99 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 RPS23P62266 143 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms