RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FBXW4P57775 412 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 GPX6P59796 221 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 PAGE2BQ5JRK9 111 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 RAET1LQ5VY80 246 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 MOB1BQ7L9L4 216 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 NRMQ8IXM6 262 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 FTMTQ8N4E7 242 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 CCDC71LQ8N9Z2 235 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 FBXL13Q8NEE6 735 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 CCDC148Q8NFR7 591 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR10H4Q8NGA5 316 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR10G3Q8NGC4 313 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR6C4Q8NGE1 309 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 CHP1Q99653 195 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 P2RY13Q9BPV8 354 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 PYGO2Q9BRQ0 406 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 EHD1Q9H4M9 534 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 RNF167Q9H6Y7 350 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 EXO5Q9H790 373 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 GEMIN7Q9H840 131 aaKnown RBP2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZDHHC11Q9H8X9 412 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF275Q9NSD4 429 aaPredicted RBP2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 GIN1Q9NXP7 522 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 IKZF2Q9UKS7 526 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 CAB39Q9Y376 341 aaPredicted RBP2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 NEUROG3Q9Y4Z2 214 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 NUP188Q5SRE5 1749 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 A2ML1A8K2U0 1454 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 MYH3P11055 1940 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 MYH6P13533 1939 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 NWD1Q149M9 1564 aa2.44□□□□□ -2.02
HMGN1P28-201ENST00000521340 OVOS2A0A0J9YW53 1432 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 CPSF1Q10570 1443 aaKnown RBP2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 OVOS2Q6IE36 1432 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 RIMS2Q9UQ26 1411 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 TJP1Q07157 1748 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 PKD1L3Q7Z443 1732 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 ABCA3Q99758 1704 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 TRPM3Q9HCF6 1732 aaPredicted RBP2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 WNK3Q9BYP7 1800 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 CCDC182A6NF36 153 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 A6NIZ1 184 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZFP92A6NM28 416 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 H0YIV9 168 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 UGT1A9O60656 530 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 KRT14P02533 472 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 CCDC166P0CW27 439 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 SHMT2P34897 504 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 NSG1P42857 185 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 DIO3P55073 304 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 DLX1P56177 255 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 RAP1BP61224 184 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 KCNJ2P63252 427 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 TGFBR3Q03167 851 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 SPAG1Q07617 926 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 RCN1Q15293 331 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 C1orf100Q5SVJ3 147 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 CTRB2Q6GPI1 263 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 SLC8B1Q6J4K2 584 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF544Q6NX49 715 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 TFAP2EQ6VUC0 442 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 BZW1Q7L1Q6 419 aaKnown RBP2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF589Q86UQ0 364 aaPredicted RBP2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 MTURNQ8N3F0 131 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 CADM2Q8N3J6 435 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 C11orf42Q8N5U0 333 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 B3GNT7Q8NFL0 401 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR1S2Q8NGQ3 325 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 RHOXF1Q8NHV9 184 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 AGR3Q8TD06 166 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 TSEN15Q8WW01 171 aaKnown RBP2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 FRAT1Q92837 279 aaPredicted RBP2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 NEIL2Q969S2 332 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 TECTBQ96PL2 329 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 BPIFA3Q9BQP9 254 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 TMEM246Q9BRR3 403 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 UBXN6Q9BZV1 441 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 MFFQ9GZY8 342 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 TNFRSF19Q9NS68 423 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 MARCH5Q9NX47 278 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 BFARQ9NZS9 450 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 KIAA1257Q9ULG3 409 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 COPS3Q9UNS2 423 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 V9GY05 133 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 PXDNLA1KZ92 1463 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 GLI3P10071 1580 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 ALS2Q96Q42 1657 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 ANKRD36CQ5JPF3 1778 aa2.43□□□□□ -2.02
HMGN1P28-201ENST00000521340 EDC4Q6P2E9 1401 aaKnown RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 SHANK3Q9BYB0 1731 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 A0A1B0GUL6 1792 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 UBR2Q8IWV8 1755 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 ADAMTSL3P82987 1691 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 IGKV1D-13A0A0B4J2D9 117 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 GOLGA8SH3BPF8 625 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 CCL21O00585 134 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 MRPS12O15235 138 aaKnown RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 TBL1XO60907 577 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 CDH16O75309 829 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms