RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 SH3PXD2BA1X283 911 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 BBIP1A8MTZ0 92 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 MRASO14807 208 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 UBL3O95164 117 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 NR4A1P22736 598 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 GZMKP49863 264 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 TAS2R41P59536 307 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 KLF10Q13118 480 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 IQCCQ4KMZ1 466 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 ERICH5Q6P6B1 374 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 PIWIL3Q7Z3Z3 882 aaKnown RBP17.75■□□□□ 0.43
SNHG6-203ENST00000520944 CARM1Q86X55 608 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 WDFY1Q8IWB7 410 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 LRRC17Q8N6Y2 441 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 PCYOX1LQ8NBM8 494 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 SLC25A44Q96H78 314 aaPredicted RBP17.75■□□□□ 0.43
SNHG6-203ENST00000520944 DOK1Q99704 481 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 DYNLRB1Q9NP97 96 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 FGFR1OP2Q9NVK5 253 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 GID8Q9NWU2 228 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 FBXL3Q9UKT7 428 aa17.75■□□□□ 0.43
SNHG6-203ENST00000520944 LOC100653049A0A140TA62 436 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 VWC2LB2RUY7 222 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 BLOC1S5-TXNDC5H3BN57 136 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 KRT34O76011 436 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 IGHV4-31P0DP07 118 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 GIPRP48546 466 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 GALK2Q01415 458 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 SF3A3Q12874 501 aaKnown RBP eCLIP17.74■□□□□ 0.433e-8■■■■■ 29.7
SNHG6-203ENST00000520944 GKAP1Q5VSY0 366 aaPredicted RBP17.74■□□□□ 0.43
SNHG6-203ENST00000520944 REP15Q6BDI9 236 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 NANOGNBQ7Z5D8 188 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 TSPYL5Q86VY4 417 aaPredicted RBP17.74■□□□□ 0.43
SNHG6-203ENST00000520944 CALHM3Q86XJ0 350 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 NEU4Q8WWR8 484 aaPredicted RBP17.74■□□□□ 0.43
SNHG6-203ENST00000520944 TMEM54Q969K7 222 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 MS4A3Q96HJ5 214 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 ZNF426Q9BUY5 554 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 BEX2Q9BXY8 128 aa17.74■□□□□ 0.43
SNHG6-203ENST00000520944 CHD3Q12873 2000 aaKnown RBP17.74■□□□□ 0.43
SNHG6-203ENST00000520944 BCL10O95999 233 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 ASAH2BP0C7U1 165 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 DAOP14920 347 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 ZNF14P17017 642 aaPredicted RBP17.73■□□□□ 0.43
SNHG6-203ENST00000520944 LSP1P33241 339 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 CRYBA2P53672 197 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 MELKQ14680 651 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 DEF8Q6ZN54 512 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 SLC22A24Q8N4F4 322 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 C10orf82Q8WW14 230 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 POLR2J2Q9GZM3 115 aaKnown RBP17.73■□□□□ 0.43
SNHG6-203ENST00000520944 POLR2J3Q9H1A7 115 aaKnown RBP17.73■□□□□ 0.43
SNHG6-203ENST00000520944 SAR1AQ9NR31 198 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 ARFGEF3Q5TH69 2177 aa17.73■□□□□ 0.43
SNHG6-203ENST00000520944 COL6A5A8TX70 2615 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 A0A1W2PRG6 482 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 TMEM129A0AVI4 362 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 FXYD1O00168 92 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 FARS2O95363 451 aaKnown RBP17.72■□□□□ 0.43
SNHG6-203ENST00000520944 IGHG1P01857 330 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 MT-ND1P03886 318 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 OR8G3PP0DMU2 310 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 ZNF35P13682 527 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 APEHP13798 732 aaKnown RBP17.72■□□□□ 0.43
SNHG6-203ENST00000520944 RBM34P42696 430 aaKnown RBP17.72■□□□□ 0.43
SNHG6-203ENST00000520944 CLRN1P58418 232 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 SKA3Q8IX90 412 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 ZCCHC24Q8N2G6 241 aaKnown RBP17.72■□□□□ 0.43
SNHG6-203ENST00000520944 ZNF583Q96ND8 569 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 PRSS27Q9BQR3 290 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 MEPEQ9NQ76 525 aaPredicted RBP17.72■□□□□ 0.43
SNHG6-203ENST00000520944 TMEM160Q9NX00 188 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 RIMS3Q9UJD0 308 aa17.72■□□□□ 0.43
SNHG6-203ENST00000520944 MCIDASD6RGH6 385 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 DHHO43323 396 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 OR5F1O95221 314 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 ADRA2AP08913 450 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 QDPRP09417 244 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 ZNF16P17020 682 aaPredicted RBP17.71■□□□□ 0.43
SNHG6-203ENST00000520944 FUT1P19526 365 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 TNFRSF1BP20333 461 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 EVX1P49640 407 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 RPS23P62266 143 aaKnown RBP17.71■□□□□ 0.43
SNHG6-203ENST00000520944 RAB39AQ14964 217 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 LRFN4Q6PJG9 635 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 CXXC5Q7LFL8 322 aaKnown RBP17.71■□□□□ 0.43
SNHG6-203ENST00000520944 NKAIN4Q8IVV8 208 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 CDK20Q8IZL9 346 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 TMEM239Q8WW34 195 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 ZNF75AQ96N20 296 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 SHARPINQ9H0F6 387 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 ZNF224Q9NZL3 707 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 LPAR3Q9UBY5 353 aa17.71■□□□□ 0.43
SNHG6-203ENST00000520944 CUBNO60494 3623 aa17.71■□□□□ 0.42
SNHG6-203ENST00000520944 SVEP1Q4LDE5 3571 aa17.7■□□□□ 0.42
SNHG6-203ENST00000520944 LOC100289279A0A1B0GTE1 492 aa17.7■□□□□ 0.42
SNHG6-203ENST00000520944 SYNGR3O43761 229 aa17.7■□□□□ 0.42
SNHG6-203ENST00000520944 LMX1BO60663 402 aa17.7■□□□□ 0.42
SNHG6-203ENST00000520944 SHOX2O60902 331 aaPredicted RBP17.7■□□□□ 0.42
SNHG6-203ENST00000520944 STAMBPO95630 424 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms