RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PPP1R14AQ96A00 147 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 ZNF285Q96NJ3 590 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 ZNF768Q9H5H4 540 aaKnown RBP10.28□□□□□ -0.76
CLK4-206ENST00000520878 NUDT15Q9NV35 164 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 SLC39A1Q9NY26 324 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 CKLFQ9UBR5 152 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 ARID1AO14497 2285 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 VPS13AQ96RL7 3174 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 MEIS3P1A6NDR6 274 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 TRAPPC6AO75865 159 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 HLA-DOBP13765 273 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 RPL27P61353 136 aaKnown RBP10.28□□□□□ -0.76
CLK4-206ENST00000520878 BDH1Q02338 343 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 GLO1Q04760 184 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 FMODQ06828 376 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 CDC20Q12834 499 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 SNTB2Q13425 540 aaKnown RBP10.28□□□□□ -0.76
CLK4-206ENST00000520878 KLHL24Q6TFL4 600 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 TPRA1Q86W33 373 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 SCAIQ8N9R8 606 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 S100A16Q96FQ6 103 aaKnown RBP10.28□□□□□ -0.76
CLK4-206ENST00000520878 ZNF426Q9BUY5 554 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 RANGRFQ9HD47 186 aaPredicted RBP10.28□□□□□ -0.76
CLK4-206ENST00000520878 STMN3Q9NZ72 180 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 V9GY05 133 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 A0A087WV48 116 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 IL11P20809 199 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 RIDAP52758 137 aaKnown RBP10.28□□□□□ -0.76
CLK4-206ENST00000520878 GALK2Q01415 458 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 FOXF1Q12946 379 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 ALKBH1Q13686 389 aaKnown RBP10.28□□□□□ -0.76
CLK4-206ENST00000520878 SLC35D3Q5M8T2 416 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 TMEM69Q5SWH9 247 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 DMKNQ6E0U4 476 aaPredicted RBP10.28□□□□□ -0.76
CLK4-206ENST00000520878 C17orf82Q86X59 251 aaPredicted RBP10.28□□□□□ -0.76
CLK4-206ENST00000520878 ADGRG3Q86Y34 549 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 IL17RDQ8NFM7 739 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 ZNF524Q96C55 264 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 CACNG6Q9BXT2 260 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 RAB33BQ9H082 229 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 MED28Q9H204 178 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 SLC22A11Q9NSA0 550 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 SLCO1C1Q9NYB5 712 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 MOKQ9UQ07 419 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 KLHDC2Q9Y2U9 406 aa10.28□□□□□ -0.76
CLK4-206ENST00000520878 TP53BP1Q12888 1972 aaPredicted RBP10.27□□□□□ -0.76
CLK4-206ENST00000520878 DUSP3P51452 185 aaPredicted RBP10.27□□□□□ -0.77
CLK4-206ENST00000520878 BIDP55957 195 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 SLC26A5P58743 744 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 PITPNAQ00169 270 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 PUDPQ08623 228 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 COL19A1Q14993 1142 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 EEF1A1P5Q5VTE0 462 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 MDGA2Q7Z553 956 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 SLC35B4Q969S0 331 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 DDIT4LQ96D03 193 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 WDFY2Q96P53 400 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 FYTTD1Q96QD9 318 aaKnown RBP10.27□□□□□ -0.77
CLK4-206ENST00000520878 TP53I11O14683 189 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 SEC14L5O43304 696 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 MT-ND4P03905 459 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 RLN1P04808 185 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 CELA2AP08217 269 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 H2BFMP0C1H6 154 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 MST1P26927 711 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 GIFP27352 417 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 RFX2P48378 723 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 CLRN1P58418 232 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 NANOS3P60323 173 aaKnown RBP10.27□□□□□ -0.77
CLK4-206ENST00000520878 PYHIN1Q6K0P9 492 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 ZNF627Q7L945 461 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 SYS1Q8N2H4 156 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 GPR148Q8TDV2 347 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 B3GNT4Q9C0J1 378 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 RBFOX1Q9NWB1 397 aaKnown RBP10.27□□□□□ -0.77
CLK4-206ENST00000520878 ING3Q9NXR8 418 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 PRSS37A4D1T9 235 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 B4DXG7 233 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 WISP1O95388 367 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 UCHL1P09936 223 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 JMJD7P0C870 316 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 EFNA3P52797 238 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 CLDN6P56747 220 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 DGCR2P98153 550 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 SGCAQ16586 387 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 DNM1P34Q6PK57 102 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 CD200R1LQ6Q8B3 271 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 OVCH1Q7RTY7 1134 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 PRSS42Q7Z5A4 293 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 NR2C2APQ86WQ0 139 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 OR6N1Q8NGY5 312 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 OR10AC1Q8NH08 325 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 SYNPRQ8TBG9 265 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 ABHD1Q96SE0 405 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 LIN7BQ9HAP6 207 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 PAQR5Q9NXK6 330 aaPredicted RBP10.27□□□□□ -0.77
CLK4-206ENST00000520878 HAO2Q9NYQ3 351 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 PISDQ9UG56 409 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 B9D1Q9UPM9 204 aa10.27□□□□□ -0.77
CLK4-206ENST00000520878 DHDHQ9UQ10 334 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms