RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SYNGR3O43761 229 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 UBL3O95164 117 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 LYPD3O95274 346 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 RAB36O95755 333 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 THY1P04216 161 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 APEX1P27695 318 aaKnown RBP16.92■□□□□ 0.3
PABPC1-215ENST00000520804 IL2RGP31785 369 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 GIPRP48546 466 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 ZP4Q12836 540 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 ZNF74Q16587 644 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 CR1LQ2VPA4 569 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 OR4D11Q8NGI4 311 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 OR6X1Q8NH79 312 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 TMEM54Q969K7 222 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 ZNF385DQ9H6B1 395 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 FBXL3Q9UKT7 428 aa16.92■□□□□ 0.3
PABPC1-215ENST00000520804 M0R233 179 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 ANGPT2O15123 496 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 FXNQ16595 210 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 TTC33Q6PID6 262 aaPredicted RBP16.91■□□□□ 0.3
PABPC1-215ENST00000520804 SLC35D2Q76EJ3 337 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 PIWIL3Q7Z3Z3 882 aaKnown RBP16.91■□□□□ 0.3
PABPC1-215ENST00000520804 RBM45Q8IUH3 476 aaKnown RBP16.91■□□□□ 0.3
PABPC1-215ENST00000520804 SLC30A8Q8IWU4 369 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 ADAMTS16Q8TE57 1224 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 SNX18Q96RF0 628 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 MS4A5Q9H3V2 200 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 KAT8Q9H7Z6 458 aaKnown RBP16.91■□□□□ 0.3
PABPC1-215ENST00000520804 INTS9Q9NV88 658 aaKnown RBP16.91■□□□□ 0.3
PABPC1-215ENST00000520804 TAS2R5Q9NYW4 299 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 GLTPQ9NZD2 209 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 REV1Q9UBZ9 1251 aa16.91■□□□□ 0.3
PABPC1-215ENST00000520804 LYNX1G3V0Z9 82 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 CH25HO95992 272 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 LYNX1P0DP58 116 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 GALK2Q01415 458 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 RAB39AQ14964 217 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 TRIP10Q15642 601 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 GKAP1Q5VSY0 366 aaPredicted RBP16.9■□□□□ 0.3
PABPC1-215ENST00000520804 PATL1Q86TB9 770 aaKnown RBP16.9■□□□□ 0.3
PABPC1-215ENST00000520804 TSPYL5Q86VY4 417 aaPredicted RBP16.9■□□□□ 0.3
PABPC1-215ENST00000520804 ZNF584Q8IVC4 421 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 SKA3Q8IX90 412 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 LINC01356Q8N9X3 169 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 VANGL1Q8TAA9 524 aaPredicted RBP16.9■□□□□ 0.3
PABPC1-215ENST00000520804 TSPEARQ8WU66 669 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 THOC1Q96FV9 657 aaKnown RBP16.9■□□□□ 0.3
PABPC1-215ENST00000520804 SYT3Q9BQG1 590 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 NANSQ9NR45 359 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 SLC7A7Q9UM01 511 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 TRIM33Q9UPN9 1127 aa16.9■□□□□ 0.3
PABPC1-215ENST00000520804 TRAPPC13A5PLN9 417 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 RNF13O43567 381 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 SERPINA5P05154 406 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 PATE4P0C8F1 98 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 CD247P20963 164 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 PCGF2P35227 344 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 RPS23P62266 143 aaKnown RBP16.89■□□□□ 0.29
PABPC1-215ENST00000520804 SRSF2Q01130 221 aaKnown RBP16.89■□□□□ 0.29
PABPC1-215ENST00000520804 NFYCQ13952 458 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 ELFN2Q5R3F8 820 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 LRFN4Q6PJG9 635 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 LRP11Q86VZ4 500 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 SLC22A24Q8N4F4 322 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 LRRC17Q8N6Y2 441 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 FGFBP3Q8TAT2 258 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 ZNF566Q969W8 418 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 TAMM41Q96BW9 452 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 SLC25A44Q96H78 314 aaPredicted RBP16.89■□□□□ 0.29
PABPC1-215ENST00000520804 C1orf159Q96HA4 380 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 MPP4Q96JB8 637 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 MAGEB18Q96M61 343 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 ZNF426Q9BUY5 554 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 C19orf24Q9BVV8 132 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 SLC19A3Q9BZV2 496 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 PCDHAC1Q9H158 963 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 SLC7A8Q9UHI5 535 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 ZNF229Q9UJW7 825 aa16.89■□□□□ 0.29
PABPC1-215ENST00000520804 KPNA4O00629 521 aaPredicted RBP16.88■□□□□ 0.29
PABPC1-215ENST00000520804 ASAH2BP0C7U1 165 aa16.88■□□□□ 0.29
PABPC1-215ENST00000520804 OR8G3PP0DMU2 310 aa16.88■□□□□ 0.29
PABPC1-215ENST00000520804 ALDH3B1P43353 468 aa16.88■□□□□ 0.29
PABPC1-215ENST00000520804 CDH15P55291 814 aa16.88■□□□□ 0.29
PABPC1-215ENST00000520804 MELKQ14680 651 aa16.88■□□□□ 0.29
PABPC1-215ENST00000520804 UGT2A3Q6UWM9 527 aa16.88■□□□□ 0.29
PABPC1-215ENST00000520804 OR10A6Q8NH74 314 aa16.88■□□□□ 0.29
PABPC1-215ENST00000520804 TMEM38BQ9NVV0 291 aa16.88■□□□□ 0.29
PABPC1-215ENST00000520804 MYEF2Q9P2K5 600 aaKnown RBP16.88■□□□□ 0.29
PABPC1-215ENST00000520804 DHHO43323 396 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 ENTPD5O75356 428 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 HPXP02790 462 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 HIST1H2ABP04908 130 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 PGA4P0DJD7 388 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 PGA3P0DJD8 388 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 TCN1P20061 433 aaPredicted RBP16.87■□□□□ 0.29
PABPC1-215ENST00000520804 LSP1P33241 339 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 GZMMP51124 257 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 CRYBA2P53672 197 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 SEC24CP53992 1094 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 MAD2L1BPQ15013 274 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms