RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 IL11P20809 199 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 RCVRNP35243 200 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 SOX2P48431 317 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 RAB25P57735 213 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 EGR3Q06889 387 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 EFR3AQ14156 821 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 Q499Y3 187 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 UBE2NLQ5JXB2 153 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 CMTM4Q8IZR5 234 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 ZNF417Q8TAU3 575 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 STK35Q8TDR2 534 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 ZNF587Q96SQ5 575 aaPredicted RBP23.22■■□□□ 1.31
COL13A1-213ENST00000520267 TXNIPQ9H3M7 391 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 SLCO1C1Q9NYB5 712 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 CAMK2AQ9UQM7 478 aa23.22■■□□□ 1.31
COL13A1-213ENST00000520267 AIPO00170 330 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 PITPNAQ00169 270 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 INSM1Q01101 510 aaPredicted RBP23.21■■□□□ 1.31
COL13A1-213ENST00000520267 PRR23CQ6ZRP0 262 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 OR2G2Q8NGZ5 317 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 CREB3L1Q96BA8 519 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 SNX18Q96RF0 628 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 GALNT9Q9HCQ5 603 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 FKBP7Q9Y680 259 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 TMEM14AQ9Y6G1 99 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 V9GY05 133 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 TRBV5-5A0A0J9YX44 114 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 OR4C45A6NMZ5 311 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 AHSA1O95433 338 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 HLA-DQA2P01906 255 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 CENPAP49450 140 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 MRPL28Q13084 256 aaKnown RBP23.21■■□□□ 1.31
COL13A1-213ENST00000520267 HACD4Q5VWC8 232 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 FAM199XQ6PEV8 388 aaPredicted RBP23.21■■□□□ 1.31
COL13A1-213ENST00000520267 PAPD4Q6PIY7 484 aaKnown RBP23.21■■□□□ 1.31
COL13A1-213ENST00000520267 Q7L0L9 218 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 PRSS45Q7RTY3 260 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 MISPQ8IVT2 679 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 OTOSQ8NHW6 89 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 NSMAFQ92636 917 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 RARRES3Q9UL19 164 aa23.21■■□□□ 1.31
COL13A1-213ENST00000520267 TNRC6BQ9UPQ9 1833 aaKnown RBP23.21■■□□□ 1.31
COL13A1-213ENST00000520267 TRBV11-1A0A0K0K1C0 115 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 TMEM200CA6NKL6 621 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 OR6A2O95222 327 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 ARSBP15848 533 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 CLDN12P56749 244 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 DCDP81605 110 aaKnown RBP23.2■■□□□ 1.3
COL13A1-213ENST00000520267 MELKQ14680 651 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 NTRK2Q16620 822 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 ADAMTS14Q8WXS8 1223 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 HGDQ93099 445 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 PMEPA1Q969W9 287 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 RNF170Q96K19 258 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 CCDC74BQ96LY2 380 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 GFM1Q96RP9 751 aaKnown RBP23.2■■□□□ 1.3
COL13A1-213ENST00000520267 WDR77Q9BQA1 342 aaPredicted RBP23.2■■□□□ 1.3
COL13A1-213ENST00000520267 SUSD2Q9UGT4 822 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 SLC16A7O60669 478 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 TRIM3O75382 744 aaPredicted RBP23.2■■□□□ 1.3
COL13A1-213ENST00000520267 DPP4P27487 766 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 ETFDHQ16134 617 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 STAC2Q6ZMT1 411 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.2■■□□□ 1.3
COL13A1-213ENST00000520267 OR10AC1Q8NH08 325 aa23.2■■□□□ 1.3
COL13A1-213ENST00000520267 VSX1Q9NZR4 365 aaPredicted RBP23.2■■□□□ 1.3
COL13A1-213ENST00000520267 ANKUB1A6NFN9 424 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 ZNF593O00488 134 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-213ENST00000520267 EMP2P54851 167 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 HLA-BQ31612 363 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 STPG1Q5TH74 334 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 LCN10Q6JVE6 187 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 MTFR2Q6P444 385 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 SIAH3Q8IW03 269 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 KDM8Q8N371 416 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 PRSS35Q8N3Z0 413 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 TOMM5Q8N4H5 51 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 NUBPLQ8TB37 319 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 TMEM234Q8WY98 164 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 ATOH1Q92858 354 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-213ENST00000520267 CMTM3Q96MX0 182 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 TCF7L1Q9HCS4 588 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 IGLV1-36A0A0B4J1U3 117 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 FTCDNL1E5RQL4 147 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 HLA-DOBP13765 273 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 ADRA2CP18825 462 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 C17orf67Q0P5P2 114 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 ODF4Q2M2E3 257 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 ZNF385CQ66K41 422 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-213ENST00000520267 BAIAP2L2Q6UXY1 529 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 SLC35D2Q76EJ3 337 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 FCRLAQ7L513 359 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 SLC25A38Q96DW6 304 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 LIN7BQ9HAP6 207 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 APMAPQ9HDC9 416 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 MRPL22Q9NWU5 206 aaKnown RBP23.19■■□□□ 1.3
COL13A1-213ENST00000520267 MED11Q9P086 117 aa23.19■■□□□ 1.3
COL13A1-213ENST00000520267 PPIEQ9UNP9 301 aaKnown RBP23.19■■□□□ 1.3
COL13A1-213ENST00000520267 ADAMTS9Q9P2N4 1935 aa23.18■■□□□ 1.3
COL13A1-213ENST00000520267 H3BSH0 61 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms