RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GTF2E2P29084 291 aaKnown RBP3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 NAMPTP43490 491 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 CX3CR1P49238 355 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 MRPL19P49406 292 aaKnown RBP3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 TAF6P49848 677 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 ADARB1P78563 741 aaKnown RBP3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 PAX5Q02548 391 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 ZNF92Q03936 586 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 LIPEQ05469 1076 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 KIAA0087Q14695 138 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 TGIF2LYQ8IUE0 185 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 FBXL16Q8N461 479 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 ZADH2Q8N4Q0 377 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 FANK1Q8TC84 345 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 UXTQ9UBK9 157 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 PACSIN2Q9UNF0 486 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 PLEKHG2Q9H7P9 1386 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 TRAV25A0A0B4J276 109 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 A0A0B4J2A0 478 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 A0A0G2JLM5 398 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 KIR2DL5BA0A0G2JN68 375 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 KIR2DL5BA0A0G2JPC4 375 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 SMCO2A6NFE2 343 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 H0YC42 278 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 PPP1R2P9O14990 202 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 FAM189A1O60320 539 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 HUS1O60921 280 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 CLPXO76031 633 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 HPNP05981 417 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 MYL2P10916 166 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 GZMAP12544 262 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 HTR1EP28566 365 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 CCT6AP40227 531 aaKnown RBP3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 PEX19P40855 299 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 CSNK1EP49674 416 aaKnown RBP3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 NUP107P57740 925 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 PRPS1P60891 318 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 IRX3P78415 501 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 KRTAP1-1Q07627 177 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 XKR4Q5GH76 650 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 FHL5Q5TD97 284 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 CNIH2Q6PI25 160 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 IL34Q6ZMJ4 242 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 RALGPS2Q86X27 583 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 MICU2Q8IYU8 434 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 KIR2DL5AQ8N109 375 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 FAM184AQ8NB25 1140 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 OR2L5Q8NG80 312 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 KIR2DL5BQ8NHK3 375 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 DCUN1D4Q92564 292 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 TMEM54Q969K7 222 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 RPUSD4Q96CM3 377 aaKnown RBP3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 SLC35E1Q96K37 410 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 YTHDF1Q9BYJ9 559 aaKnown RBP3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 NEUROG2Q9H2A3 272 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 CCL28Q9NRJ3 127 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 PRR34Q9NV39 138 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 SHPKQ9UHJ6 478 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 TBC1D24Q9ULP9 559 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 TP53TG3Q9ULZ0 132 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 ZNF256Q9Y2P7 627 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 MSH6P52701 1360 aa3.74□□□□□ -1.81
HMGB1P46-201ENST00000520062 A0A0G2JN53 185 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 KBTBD11-OT1A0A1B0GTJ5 212 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 A0A1B0GTQ1 180 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 FAM231BA6NCW3 169 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 ZNF726A6NNF4 738 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 HAT1O14929 419 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 EIF3HO15372 352 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 EMC8O43402 210 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 GKN3PP0CG01 181 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 TDGF1P13385 188 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 HMOX2P30519 316 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 BTCP35070 178 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 AQP2P41181 271 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 MAGEA1P43355 309 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 UQCRFS1P47985 274 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 TDGF1P3P51864 188 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 LYZP61626 148 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 SELENBP1Q13228 472 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 IL17AQ16552 155 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 PGGHGQ32M88 737 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 TWF2Q6IBS0 349 aaKnown RBP3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 ANKRD26P1Q6NSI1 321 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 OR2G3Q8NGZ4 309 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 GLYATL2Q8WU03 294 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 FAM151AQ8WW52 585 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 NDRG1Q92597 394 aaKnown RBP3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 PIK3IP1Q96FE7 263 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 MED8Q96G25 268 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 PKNOX2Q96KN3 472 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 IMMP1LQ96LU5 166 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 ECSITQ9BQ95 431 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 OSBPL10Q9BXB5 764 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 ELOVL6Q9H5J4 265 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 CLN8Q9UBY8 286 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 ING4Q9UNL4 249 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 MMP24Q9Y5R2 645 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 CNTNAP1P78357 1384 aa3.73□□□□□ -1.81
HMGB1P46-201ENST00000520062 ARHGAP23Q9P227 1491 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms