RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 MFGE8Q08431 387 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 PLCXD3Q63HM9 321 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 WDR74Q6RFH5 385 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SLC24A4Q8NFF2 622 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 FIBINQ8TAL6 211 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 RHOVQ96L33 236 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 MMP24Q9Y5R2 645 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 POMT1Q9Y6A1 747 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 G3V3Q6 166 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 CSF3P09919 207 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SDC1P18827 310 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 RBMS3Q6XE24 437 aaKnown RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 TCTE3Q8IZS6 198 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SLC41A2Q96JW4 573 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 KCNIP2Q9NS61 270 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SLX4Q8IY92 1834 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 RFPL4AA6NLU0 287 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 RNF212BA8MTL3 300 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 ZNF724A8MTY0 619 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 RFPL4AL1F8VTS6 287 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 IQCF3P0C7M6 154 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 ZNF140P52738 457 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SMAD2Q15796 467 aaKnown RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 YOD1Q5VVQ6 348 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 OR5M10Q6IEU7 315 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 BRICD5Q6PL45 260 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SERPINA11Q86U17 422 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 CPNE4Q96A23 557 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 PRRC1Q96M27 445 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 C1GALT1Q9NS00 363 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SDK2Q58EX2 2172 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 DOCK11Q5JSL3 2073 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 MTHFD2P13995 350 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 LMNTD1Q8N9Z9 388 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SMAD6O43541 496 aaKnown RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 APLNRP35414 380 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 CLDN2P57739 230 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 PIANPQ8IYJ0 282 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 CDRT4Q8N9R6 151 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 MED16Q9Y2X0 877 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 TJP1Q07157 1748 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 MEGF11A6BM72 1044 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 A6NIZ1 184 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 GABRR3A8MPY1 467 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SULT2B1O00204 365 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 FUT1P19526 365 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 HOXA11P31270 313 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 RAP1BP61224 184 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 TMEM31Q5JXX7 168 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 OR4K15Q8NH41 348 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 FAM3CQ92520 227 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 RTP3Q9BQQ7 232 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 SEMA4GQ9NTN9 838 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 MYADML2A6NDP7 307 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 RANP62826 216 aaKnown RBP8.07□□□□□ -1.12
CSMD1-206ENST00000520002 ZIC5Q96T25 663 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 MBOAT4Q96T53 435 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 LTB4R2Q9NPC1 389 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 HIF1ANQ9NWT6 349 aa8.07□□□□□ -1.12
CSMD1-206ENST00000520002 COL2A1P02458 1487 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-206ENST00000520002 SUOXP51687 545 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 SYT6Q5T7P8 510 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-206ENST00000520002 C15orf39Q6ZRI6 1047 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 ZNF417Q8TAU3 575 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 SLC25A46Q96AG3 418 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 AK3Q9UIJ7 227 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 GPR45Q9Y5Y3 372 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 ACACAQ13085 2346 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 SEC14L6B5MCN3 397 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 ITGB8P26012 769 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 CPZQ66K79 652 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 PM20D1Q6GTS8 502 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 TMEM81Q6P7N7 255 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 SERINC2Q96SA4 455 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 OR51I2Q9H344 312 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 ZDHHC11Q9H8X9 412 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 ROS1P08922 2347 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 M0R143 59 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 DVL1O14640 695 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 P2RY2P41231 377 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 DVL1P1P54792 670 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-206ENST00000520002 SLC7A9P82251 487 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 MEPCEQ7L2J0 689 aaKnown RBP8.06□□□□□ -1.12
CSMD1-206ENST00000520002 CPEB2Q7Z5Q1 589 aaKnown RBP8.06□□□□□ -1.12
CSMD1-206ENST00000520002 TPRA1Q86W33 373 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 RNF175Q8N4F7 328 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 NRIP3Q9NQ35 241 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 H7BYZ3 331 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 PPP6CO00743 305 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 RGS11O94810 467 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 HPNP05981 417 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 NTSR1P30989 418 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 S100A7P31151 101 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 MAMDC4Q6UXC1 1216 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 TMEM239Q8WW34 195 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 ZNF443Q9Y2A4 671 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-206ENST00000520002 GJB3O75712 270 aa8.06□□□□□ -1.12
CSMD1-206ENST00000520002 HNRNPA1P09651 372 aaKnown RBP eCLIP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms