RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ACTR1AP61163 376 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 PPIL2Q13356 520 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 TTLL9Q3SXZ7 439 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 KCTD21Q4G0X4 260 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 Q6ZR03 302 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 SLC25A48Q6ZT89 311 aaKnown RBP3.5□□□□□ -1.85
PTPN12-213ENST00000519553 ZNF695Q8IW36 515 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 ZCCHC7Q8N3Z6 543 aaKnown RBP3.5□□□□□ -1.85
PTPN12-213ENST00000519553 SMIM10Q96HG1 83 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 WFIKKN1Q96NZ8 548 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 GABARAPL3Q9BY60 117 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 SGK2Q9HBY8 427 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 SLC40A1Q9NP59 571 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 MSH6P52701 1360 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 CARMIL3Q8ND23 1372 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 CEMIPQ8WUJ3 1361 aa3.5□□□□□ -1.85
PTPN12-213ENST00000519553 CLRN2A0PK11 232 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 PCP4L1A6NKN8 68 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 HAS3O00219 553 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 TLX1NBP0CAT3 122 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 ATP1B2P14415 290 aaPredicted RBP3.49□□□□□ -1.85
PTPN12-213ENST00000519553 ETS2P15036 469 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 SLC2A5P22732 501 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 PRPHP41219 470 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 GYG1P46976 350 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 CCR8P51685 355 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 RPS21P63220 83 aaKnown RBP3.49□□□□□ -1.85
PTPN12-213ENST00000519553 LRRC31Q6UY01 552 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 H2AFVQ71UI9 128 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 PSTKQ8IV42 348 aaKnown RBP3.49□□□□□ -1.85
PTPN12-213ENST00000519553 STPG2Q8N412 459 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 FAM86B1Q8N7N1 296 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 BHLHE23Q8NDY6 225 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 SDR42E1Q8WUS8 393 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 EXOSC8Q96B26 276 aaKnown RBP3.49□□□□□ -1.85
PTPN12-213ENST00000519553 MED8Q96G25 268 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 BMFQ96LC9 184 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 CCT7Q99832 543 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 MFFQ9GZY8 342 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 ZNF282Q9UDV7 671 aaPredicted RBP3.49□□□□□ -1.85
PTPN12-213ENST00000519553 PEX16Q9Y5Y5 336 aa3.49□□□□□ -1.85
PTPN12-213ENST00000519553 BTBD17A6NE02 478 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 TCP11X1B4DZS4 312 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 FOXE1O00358 373 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-213ENST00000519553 CCL21O00585 134 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 CXCL11O14625 94 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 SURF6O75683 361 aaKnown RBP3.48□□□□□ -1.85
PTPN12-213ENST00000519553 RORAP35398 523 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 PMELP40967 661 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 SLC7A9P82251 487 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 MOBPQ13875 183 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 GK3PQ14409 553 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 LINC00483Q53H64 154 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 FAM71E1Q6IPT2 247 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 CENPPQ6IPU0 288 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 C15orf56Q8N910 161 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 GEMIN6Q8WXD5 167 aaKnown RBP3.48□□□□□ -1.85
PTPN12-213ENST00000519553 HSFY1Q96LI6 401 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 TCEANC2Q96MN5 208 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 RARRES2Q99969 163 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 NOX3Q9HBY0 568 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 INPP5EQ9NRR6 644 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 N6AMT1Q9Y5N5 214 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 SLIT3O75094 1523 aa3.48□□□□□ -1.85
PTPN12-213ENST00000519553 MN1Q10571 1320 aaPredicted RBP3.47□□□□□ -1.85
PTPN12-213ENST00000519553 OR52A4PA6NMU1 304 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 ATP5C1P36542 298 aaKnown RBP3.47□□□□□ -1.85
PTPN12-213ENST00000519553 HSD17B2P37059 387 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 EPS15P42566 896 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 C6orf226Q5I0X4 101 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 CASC1Q6TDU7 716 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 ABHD12BQ7Z5M8 362 aaPredicted RBP3.47□□□□□ -1.85
PTPN12-213ENST00000519553 LHFPL3Q86UP9 236 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 TBC1D21Q8IYX1 336 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 EIF1ADQ8N9N8 165 aaKnown RBP3.47□□□□□ -1.85
PTPN12-213ENST00000519553 SDR9C7Q8NEX9 313 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 OR1L6Q8NGR2 347 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 TSSK3Q96PN8 268 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 KCTD14Q9BQ13 255 aaPredicted RBP3.47□□□□□ -1.85
PTPN12-213ENST00000519553 OSBPL10Q9BXB5 764 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 ROPN1BQ9BZX4 212 aaPredicted RBP3.47□□□□□ -1.85
PTPN12-213ENST00000519553 FN3KRPQ9HA64 309 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 CD84Q9UIB8 345 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 WDR62O43379 1518 aa3.47□□□□□ -1.85
PTPN12-213ENST00000519553 TET2Q6N021 2002 aaPredicted RBP3.46□□□□□ -1.86
PTPN12-213ENST00000519553 IGHV3-66A0A0C4DH42 116 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 CPLX1O14810 134 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 C2P06681 752 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 RFX3P48380 749 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 FBXW4P57775 412 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 RGS9BPQ6ZS82 235 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 OR2G2Q8NGZ5 317 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 TMEM54Q969K7 222 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 SH3GL1Q99961 368 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 SLC39A3Q9BRY0 314 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 CHAC1Q9BUX1 264 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 TMEM59Q9BXS4 323 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 NT5MQ9NPB1 228 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 OPN4Q9UHM6 478 aa3.46□□□□□ -1.86
PTPN12-213ENST00000519553 NPTNQ9Y639 398 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms