RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 GGTLC2Q14390 218 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 NRN1LQ496H8 165 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 ERICH5Q6P6B1 374 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 SPATA21Q7Z572 469 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 TSPYL5Q86VY4 417 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-204ENST00000519120 RBM45Q8IUH3 476 aaKnown RBP13.63□□□□□ -0.23
MRPS28-204ENST00000519120 WDFY1Q8IWB7 410 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 SVOPLQ8N434 492 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 VANGL1Q8TAA9 524 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-204ENST00000519120 ZNF566Q969W8 418 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 SLC25A44Q96H78 314 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-204ENST00000519120 TMEM120AQ9BXJ8 343 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 GLTPQ9NZD2 209 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 ZNF224Q9NZL3 707 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 BAG5Q9UL15 447 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 MXRA5Q9NR99 2828 aa13.63□□□□□ -0.23
MRPS28-204ENST00000519120 COL6A5A8TX70 2615 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 C11orf98E9PRG8 122 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 FXYD1O00168 92 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 MGRN1O60291 552 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 LMX1BO60663 402 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 STAMBPO95630 424 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 RAB36O95755 333 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 HIST1H2ABP04908 130 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 TROVE2P10155 538 aaKnown RBP eCLIP13.62□□□□□ -0.23
MRPS28-204ENST00000519120 APEHP13798 732 aaKnown RBP13.62□□□□□ -0.23
MRPS28-204ENST00000519120 ZNF16P17020 682 aaPredicted RBP13.62□□□□□ -0.23
MRPS28-204ENST00000519120 ZNF23P17027 643 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 GLRXP35754 106 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 RBM34P42696 430 aaKnown RBP13.62□□□□□ -0.23
MRPS28-204ENST00000519120 RPS23P62266 143 aaKnown RBP13.62□□□□□ -0.23
MRPS28-204ENST00000519120 RAB1AP62820 205 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 MAPRE2Q15555 327 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 FAM166AQ6J272 317 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 HIST3H2AQ7L7L0 130 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 DPPA2Q7Z7J5 298 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 ZNF786Q8N393 782 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 HIST1H2ACQ93077 130 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 MRPL24Q96A35 216 aaKnown RBP13.62□□□□□ -0.23
MRPS28-204ENST00000519120 LRRC58Q96CX6 371 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 MS4A3Q96HJ5 214 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 PRSS27Q9BQR3 290 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 BEX2Q9BXY8 128 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 DYNLRB1Q9NP97 96 aa13.62□□□□□ -0.23
MRPS28-204ENST00000519120 YLPM1P49750 1951 aaKnown RBP13.62□□□□□ -0.23
MRPS28-204ENST00000519120 IGHV4-61A0A0C4DH41 118 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 CENPBD1B2RD01 187 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 RNF13O43567 381 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 SYNGR3O43761 229 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 SERPINI2O75830 405 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 IFNA14P01570 189 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 MT-ND1P03886 318 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 SERPINA5P05154 406 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 IGFBP1P08833 259 aaPredicted RBP13.61□□□□□ -0.23
MRPS28-204ENST00000519120 TACSTD2P09758 323 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 PGA4P0DJD7 388 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 PGA3P0DJD8 388 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 OR8G3PP0DMU2 310 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 THRBP10828 461 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 DAOP14920 347 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 PTDSS1P48651 473 aaKnown RBP13.61□□□□□ -0.23
MRPS28-204ENST00000519120 PIGFQ07326 219 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 FXNQ16595 210 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 HIST3H3Q16695 136 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 RABL3Q5HYI8 236 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 KRT80Q6KB66 452 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 HDDC2Q7Z4H3 204 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 NANOGNBQ7Z5D8 188 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 SLC22A24Q8N4F4 322 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 SEPHS2Q99611 448 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 ECSITQ9BQ95 431 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 BPESC1Q9GZL8 116 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 SHARPINQ9H0F6 387 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 MS4A5Q9H3V2 200 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 MEPEQ9NQ76 525 aaPredicted RBP13.61□□□□□ -0.23
MRPS28-204ENST00000519120 TMEM38BQ9NVV0 291 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 KCNS2Q9ULS6 477 aa13.61□□□□□ -0.23
MRPS28-204ENST00000519120 HTR3EA5X5Y0 456 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 DHHO43323 396 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 SASH3O75995 380 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 OR5F1O95221 314 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 BCL10O95999 233 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 IGHG1P01857 330 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 LSP1P33241 339 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 GIPRP48546 466 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 KLF10Q13118 480 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 CARTPTQ16568 116 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 LRFN4Q6PJG9 635 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 CARM1Q86X55 608 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 CDK20Q8IZL9 346 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 LRRC17Q8N6Y2 441 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 LIPHQ8WWY8 451 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 HPS1Q92902 700 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 MSI2Q96DH6 328 aaKnown RBP13.6□□□□□ -0.23
MRPS28-204ENST00000519120 C1orf198Q9H425 327 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 SLC7A8Q9UHI5 535 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 SH3GLB1Q9Y371 365 aa13.6□□□□□ -0.23
MRPS28-204ENST00000519120 LOC100289279A0A1B0GTE1 492 aa13.59□□□□□ -0.23
MRPS28-204ENST00000519120 NPIPB13A6NJU9 1138 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms