RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CD79A	P11912	226 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	NUDT6	P53370	316 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	SNRPD2	P62316	118 aa	Known RBP	21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	RPL18	Q07020	188 aa	Known RBP	21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	ANKDD1A	Q495B1	522 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	PHYHD1	Q5SRE7	291 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	DPPA2	Q7Z7J5	298 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	LRRC37B	Q96QE4	947 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	NDE1	Q9NXR1	346 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	A4GNT	Q9UNA3	340 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	SAMD4A	Q9UPU9	718 aa	Known RBP	21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	SPEF1	Q9Y4P9	236 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	NF1	P21359	2839 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	ACAN	P16112	2415 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	CAD	P27708	2225 aa		21.04	■□□□□ 0.96
CNOT7-204	ENST00000518885	NPIPB13	A6NJU9	1138 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	NPIPB4	C9JG80	1138 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	RAB36	O95755	333 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	IGHV4-39	P01824	125 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	HEXA	P06865	529 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	ZNF84	P51523	738 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	IDH3G	P51553	393 aa	Predicted RBP	21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	NPRL3	Q12980	569 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	TAF11	Q15544	211 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	RRM2B	Q7LG56	351 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	VTCN1	Q7Z7D3	282 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	MDP1	Q86V88	176 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	RNF113B	Q8IZP6	322 aa	Known RBP	21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	NUP37	Q8NFH4	326 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	BPIFA2	Q96DR5	249 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	HSH2D	Q96JZ2	352 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	NDEL1	Q9GZM8	345 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	GSX1	Q9H4S2	264 aa	Predicted RBP	21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	CA10	Q9NS85	328 aa		21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	FAM32A	Q9Y421	112 aa	Known RBP	21.03	■□□□□ 0.96
CNOT7-204	ENST00000518885	MGRN1	O60291	552 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	SEC14L2	O76054	403 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	PGA4	P0DJD7	388 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	PGA3	P0DJD8	388 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	SAG	P10523	405 aa	Predicted RBP	21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	IFI30	P13284	250 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	B4GALT1	P15291	398 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	SERPINF1	P36955	418 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	MELK	Q14680	651 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	CLEC2A	Q6UVW9	174 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	RHNO1	Q9BSD3	238 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	ANKRD19P	Q9H560	264 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885	C20orf141	Q9NUB4	165 aa		21.02	■□□□□ 0.96
CNOT7-204	ENST00000518885		B9A039	149 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	F13B	P05160	661 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	OR8G3P	P0DMU2	310 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	ACVR1B	P36896	505 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	AQP2	P41181	271 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	MNAT1	P51948	309 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	TNK1	Q13470	666 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	NRN1L	Q496H8	165 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	ACOT11	Q8WXI4	607 aa	Predicted RBP	21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	FBXO17	Q96EF6	278 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	ZNF442	Q9H7R0	627 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	FKBP7	Q9Y680	259 aa		21.01	■□□□□ 0.95
CNOT7-204	ENST00000518885	C2CD3	Q4AC94	2353 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	DHH	O43323	396 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	SSX4	O60224	188 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	HLA-H	P01893	362 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	CSF3	P09919	207 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	YAP1	P46937	504 aa	Known RBP	21	■□□□□ 0.95
CNOT7-204	ENST00000518885	SLC9A3	P48764	834 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	ALG10	Q5BKT4	473 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	FAM205BP	Q63HN1	556 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	GLYAT	Q6IB77	296 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	ZNF730	Q6ZMV8	503 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	CIART	Q8N365	385 aa	Predicted RBP	21	■□□□□ 0.95
CNOT7-204	ENST00000518885	NOXO1	Q8NFA2	376 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	FNDC8	Q8TC99	324 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	KRCC1	Q9NPI7	259 aa	Predicted RBP	21	■□□□□ 0.95
CNOT7-204	ENST00000518885	B3GNT2	Q9NY97	397 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	TAGLN3	Q9UI15	199 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	GDF2	Q9UK05	429 aa	Predicted RBP	21	■□□□□ 0.95
CNOT7-204	ENST00000518885	HIF3A	Q9Y2N7	669 aa		21	■□□□□ 0.95
CNOT7-204	ENST00000518885	USF3	Q68DE3	2245 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	ERCC1	P07992	297 aa	Predicted RBP	20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	QDPR	P09417	244 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	TSPAN19	P0C672	248 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	ACADS	P16219	412 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	RAB1A	P62820	205 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	SAMD4B	Q5PRF9	694 aa	Known RBP	20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	C16orf89	Q6UX73	402 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	PIGW	Q7Z7B1	504 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	SLC22A24	Q8N4F4	322 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	ASB10	Q8WXI3	467 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	SMR3A	Q99954	134 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	TXNIP	Q9H3M7	391 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	GMPR2	Q9P2T1	348 aa	Known RBP	20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	RHCG	Q9UBD6	479 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	MAGEL2	Q9UJ55	1249 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	TMEM5	Q9Y2B1	443 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	ENPP4	Q9Y6X5	453 aa		20.99	■□□□□ 0.95
CNOT7-204	ENST00000518885	NIPBL	Q6KC79	2804 aa	eCLIP	20.98	■□□□□ 0.95
CNOT7-204	ENST00000518885	IGHV2OR16-5	A0A0B4J2B6	119 aa		20.98	■□□□□ 0.95
CNOT7-204	ENST00000518885	EFCAB9	A8MZ26	197 aa		20.98	■□□□□ 0.95

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms