RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 MED18Q9BUE0 208 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 MRPL13Q9BYD1 178 aaKnown RBP10.48□□□□□ -0.73
SNF8-215ENST00000515572 ULBP2Q9BZM5 246 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 OR52D1Q9H346 318 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 ZNF556Q9HAH1 456 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 CRLF2Q9HC73 371 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 GPR35Q9HC97 309 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 NRIP3Q9NQ35 241 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 ZNF226Q9NYT6 803 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 GLTPQ9NZD2 209 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 CDH10Q9Y6N8 788 aa10.48□□□□□ -0.73
SNF8-215ENST00000515572 OR5H1A6NKK0 313 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 CASKO14936 926 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 AHCYL1O43865 530 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 TRMUO75648 421 aaKnown RBP10.47□□□□□ -0.73
SNF8-215ENST00000515572 RAD51DO75771 328 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 GOSR1O95249 250 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 EPXP11678 715 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 SDHAP31040 664 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 ACVR1BP36896 505 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 ERVK-25P63136 954 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 LGALS3BPQ08380 585 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 TOP3AQ13472 1001 aaPredicted RBP10.47□□□□□ -0.73
SNF8-215ENST00000515572 SNTB1Q13884 538 aaKnown RBP10.47□□□□□ -0.73
SNF8-215ENST00000515572 GABRA6Q16445 453 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 HIST3H3Q16695 136 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 TIMM23BQ5SRD1 257 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 THSD4Q6ZMP0 1018 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 LINGO2Q7L985 606 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 FAM122BQ7Z309 247 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 TMEM179BQ7Z7N9 219 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 HIPK1Q86Z02 1210 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 SVOPLQ8N434 492 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 NOXO1Q8NFA2 376 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 OR5K1Q8NHB7 308 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 LINC01560Q8TB33 94 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 ZNF519Q8TB69 540 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 DNAJC9Q8WXX5 260 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 GTPBP3Q969Y2 492 aaKnown RBP10.47□□□□□ -0.73
SNF8-215ENST00000515572 CENPNQ96H22 339 aaPredicted RBP10.47□□□□□ -0.73
SNF8-215ENST00000515572 ZNF570Q96NI8 536 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 WFIKKN1Q96NZ8 548 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 TSPAN32Q96QS1 320 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 ALG12Q9BV10 488 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 SMURF2Q9HAU4 748 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 NTN4Q9HB63 628 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 IL20Q9NYY1 176 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 CRIM1Q9NZV1 1036 aa10.47□□□□□ -0.73
SNF8-215ENST00000515572 ZNF346Q9UL40 294 aaKnown RBP10.47□□□□□ -0.73
SNF8-215ENST00000515572 ZNF99A8MXY4 864 aaPredicted RBP10.46□□□□□ -0.73
SNF8-215ENST00000515572 G3V2T6 193 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 XKRYO14609 159 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 IMPA2O14732 288 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 ARPC3O15145 178 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 IDH3BO43837 385 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 ENTPD5O75356 428 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 TXNDC12O95881 172 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 HOXB1P14653 301 aaPredicted RBP10.46□□□□□ -0.73
SNF8-215ENST00000515572 PAX7P23759 505 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 HOXC12P31275 282 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 FOXG1P55316 489 aaPredicted RBP10.46□□□□□ -0.73
SNF8-215ENST00000515572 RUNX1T1Q06455 604 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 DAZAP2Q15038 168 aaPredicted RBP10.46□□□□□ -0.73
SNF8-215ENST00000515572 TSC22D1Q15714 1073 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 CEACAM16Q2WEN9 425 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 PHYHD1Q5SRE7 291 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 C9orf135Q5VTT2 229 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 ANKRD34AQ69YU3 496 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 ANKRD16Q6P6B7 361 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 ADCK1Q86TW2 530 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 ZDHHC13Q8IUH4 622 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 WDFY1Q8IWB7 410 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 OR1K1Q8NGR3 316 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 MAGEE2Q8TD90 523 aaPredicted RBP10.46□□□□□ -0.73
SNF8-215ENST00000515572 LRTOMTQ8WZ04 291 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 STMN2Q93045 179 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 MARVELD3Q96A59 401 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 MUCL1Q96DR8 90 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 C14orf79Q96F83 325 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 SAMD8Q96LT4 415 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 RBP7Q96R05 134 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 KCNK17Q96T54 332 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 NIPSNAP1Q9BPW8 284 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 IFT27Q9BW83 186 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 EGLN3Q9H6Z9 239 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 NGBQ9NPG2 151 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 OBP2BQ9NPH6 170 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 TBC1D23Q9NUY8 699 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 KIF17Q9P2E2 1029 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 IL20RAQ9UHF4 553 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 ADAM18Q9Y3Q7 739 aa10.46□□□□□ -0.73
SNF8-215ENST00000515572 ANKHD1Q8IWZ3 2542 aaKnown RBP10.46□□□□□ -0.74
SNF8-215ENST00000515572 ALPK2Q86TB3 2170 aa10.45□□□□□ -0.74
SNF8-215ENST00000515572 TEX13CA0A0J9YWL9 993 aa10.45□□□□□ -0.74
SNF8-215ENST00000515572 ERICH4A6NGS2 130 aa10.45□□□□□ -0.74
SNF8-215ENST00000515572 H3BNX3 289 aa10.45□□□□□ -0.74
SNF8-215ENST00000515572 ARHGEF9O43307 516 aa10.45□□□□□ -0.74
SNF8-215ENST00000515572 DHHO43323 396 aa10.45□□□□□ -0.74
SNF8-215ENST00000515572 PPP1R3DO95685 299 aa10.45□□□□□ -0.74
SNF8-215ENST00000515572 QDPRP09417 244 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms