RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SLC25A44Q96H78 314 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-215ENST00000515516 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
TCOF1-215ENST00000515516 B3GNT2Q9NY97 397 aa11.84□□□□□ -0.51
TCOF1-215ENST00000515516 TAS2R5Q9NYW4 299 aa11.84□□□□□ -0.51
TCOF1-215ENST00000515516 GLTPQ9NZD2 209 aa11.84□□□□□ -0.51
TCOF1-215ENST00000515516 CAPN7Q9Y6W3 813 aa11.84□□□□□ -0.51
TCOF1-215ENST00000515516 NSD1Q96L73 2696 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-215ENST00000515516 CSPG4Q6UVK1 2322 aa11.83□□□□□ -0.51
TCOF1-215ENST00000515516 A0A1W2PRG6 482 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 SH3PXD2BA1X283 911 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF503-AS2A6NEH8 195 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 MCIDASD6RGH6 385 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 OR5F1O95221 314 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 LYPD3O95274 346 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 FARS2O95363 451 aaKnown RBP11.83□□□□□ -0.52
TCOF1-215ENST00000515516 IGHG1P01857 330 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 MT-ND1P03886 318 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 THY1P04216 161 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 NR4A1P22736 598 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 RBM34P42696 430 aaKnown RBP11.83□□□□□ -0.52
TCOF1-215ENST00000515516 NR4A2P43354 598 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 GZMKP49863 264 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 CLRN1P58418 232 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 RAB1AP62820 205 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 C6orf52Q5T4I8 152 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 HDDC2Q7Z4H3 204 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 MYPOPQ86VE0 399 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-215ENST00000515516 C10orf82Q8WW14 230 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 NEU4Q8WWR8 484 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-215ENST00000515516 TMEM54Q969K7 222 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 SGTBQ96EQ0 304 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 NOX3Q9HBY0 568 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 RIMS3Q9UJD0 308 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 AP3M1Q9Y2T2 418 aa11.83□□□□□ -0.52
TCOF1-215ENST00000515516 A0A096LNT2 108 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 SLC22A2O15244 555 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 ASAH2BP0C7U1 165 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 OR8G3PP0DMU2 310 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 FUT1P19526 365 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 GIPRP48546 466 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF84P51523 738 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 RPS23P62266 143 aaKnown RBP11.82□□□□□ -0.52
TCOF1-215ENST00000515516 MELKQ14680 651 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 LRRC23Q53EV4 343 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-215ENST00000515516 TMEM53Q6P2H8 277 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 PODNL1Q6PEZ8 512 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 SLC22A24Q8N4F4 322 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 OR2T12Q8NG77 320 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 TMEM239Q8WW34 195 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 LZICQ8WZA0 190 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 MS4A3Q96HJ5 214 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 TPD52L3Q96J77 140 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF583Q96ND8 569 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 FOXN4Q96NZ1 517 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 DOK1Q99704 481 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 PRSS27Q9BQR3 290 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF426Q9BUY5 554 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 RNF121Q9H920 327 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 STX18Q9P2W9 335 aaKnown RBP11.82□□□□□ -0.52
TCOF1-215ENST00000515516 CDC42EP3Q9UKI2 254 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 ADAM21Q9UKJ8 722 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 MED31Q9Y3C7 131 aa11.82□□□□□ -0.52
TCOF1-215ENST00000515516 ELOVL7A1L3X0 281 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 FAM220BPB1ANY3 271 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 FXYD1O00168 92 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 DHHO43323 396 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 SHOX2O60902 331 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-215ENST00000515516 OR7A10O76100 309 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 QDPRP09417 244 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 IGHV4-31P0DP07 118 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 THRBP10828 461 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 APEHP13798 732 aaKnown RBP11.81□□□□□ -0.52
TCOF1-215ENST00000515516 DAOP14920 347 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF14P17017 642 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-215ENST00000515516 TNFRSF1BP20333 461 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 KDELR2P33947 212 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 OR1E2P47887 323 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 EVX1P49640 407 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 DAP3P51398 398 aaKnown RBP11.81□□□□□ -0.52
TCOF1-215ENST00000515516 CRYBA2P53672 197 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 GUCY1A3Q02108 690 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 PIN1Q13526 163 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-215ENST00000515516 RAB39AQ14964 217 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 CYBRD1Q53TN4 286 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 DPPA2Q7Z7J5 298 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 TSPYL5Q86VY4 417 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-215ENST00000515516 NKAIN4Q8IVV8 208 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 WDFY1Q8IWB7 410 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 SKA3Q8IX90 412 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 PFN4Q8NHR9 129 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 TMEM255BQ8WV15 326 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 BEX2Q9BXY8 128 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 KCNN2Q9H2S1 579 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 MEPEQ9NQ76 525 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-215ENST00000515516 INIPQ9NRY2 104 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 LPAR3Q9UBY5 353 aa11.81□□□□□ -0.52
TCOF1-215ENST00000515516 SLC22A23A1A5C7 686 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 VWC2LB2RUY7 222 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 PTHP01270 115 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 IGF2P01344 180 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms