RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 SYNPRQ8TBG9 265 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 FAM107BQ9H098 131 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 MTHFD2LQ9H903 347 aaPredicted RBP9.81□□□□□ -0.84
RNF4-216ENST00000511859 SAP30LQ9HAJ7 183 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 MMP26Q9NRE1 261 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 CLPSL1A2RUU4 121 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 AKAP8O43823 692 aaKnown RBP9.8□□□□□ -0.84
RNF4-216ENST00000511859 SEC14L2O76054 403 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 CLPTM1O96005 669 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 NGFP01138 241 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 UQCRC2P22695 453 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 GIPRP48546 466 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 AQP5P55064 265 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 COPZ1P61923 177 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 FUT5Q11128 374 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 BNIP2Q12982 314 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 CAMK2DQ13557 499 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 C1DQ13901 141 aaKnown RBP9.8□□□□□ -0.84
RNF4-216ENST00000511859 HLXQ14774 488 aaPredicted RBP9.8□□□□□ -0.84
RNF4-216ENST00000511859 TAF9Q16594 264 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 C6orf136Q5SQH8 315 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 WBP2NLQ6ICG8 309 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 CGB2Q6NT52 195 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 TNFAIP8L2Q6P589 184 aaPredicted RBP9.8□□□□□ -0.84
RNF4-216ENST00000511859 HMGN2P46Q86SG4 172 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 SNX32Q86XE0 403 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 FNDC5Q8NAU1 212 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 STK35Q8TDR2 534 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 C11orf40Q8WZ69 217 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 CCL17Q92583 94 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 ELMOD3Q96FG2 381 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 LRR1Q96L50 414 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 OR52B2Q96RD2 323 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 EBF4Q9BQW3 602 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 MRI1Q9BV20 369 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 DPY30Q9C005 99 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 CCDC134Q9H6E4 229 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 AKTIPQ9H8T0 292 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 MEAF6Q9HAF1 191 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 UBAP1Q9NZ09 502 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 INSIG2Q9Y5U4 225 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 NOTCH3Q9UM47 2321 aa9.8□□□□□ -0.84
RNF4-216ENST00000511859 A0A0G2JND7 137 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 LOC102725191A0A1B0GVB3 256 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 ISPDA4D126 451 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 FAM181BA6NEQ2 426 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 SLC22A31A6NKX4 558 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 TRPC5OSA6NMA1 111 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 FTCDNL1E5RQL4 147 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 TRAPPC2LH3BP13 241 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 M0R3G1 203 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 RNASET2O00584 256 aaKnown RBP9.79□□□□□ -0.84
RNF4-216ENST00000511859 UBL3O95164 117 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 NDUFA7O95182 113 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 AHSA1O95433 338 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 IGHMP01871 453 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 SERPINA5P05154 406 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 PPIAL4GP0DN37 164 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 PNMTP11086 282 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 ZNF12P17014 697 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 GTF2E2P29084 291 aaKnown RBP9.79□□□□□ -0.84
RNF4-216ENST00000511859 IDH3AP50213 366 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 RAG2P55895 527 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 PGS1Q32NB8 556 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 MRPL2Q5T653 305 aaKnown RBP9.79□□□□□ -0.84
RNF4-216ENST00000511859 IL23RQ5VWK5 629 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 FAM205BPQ63HN1 556 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 ZNF813Q6ZN06 617 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 LSRQ86X29 649 aaPredicted RBP9.79□□□□□ -0.84
RNF4-216ENST00000511859 KIRREL3Q8IZU9 778 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 ZNF519Q8TB69 540 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 SLC25A36Q96CQ1 311 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 TRNT1Q96Q11 434 aaKnown RBP9.79□□□□□ -0.84
RNF4-216ENST00000511859 OR2M2Q96R28 347 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 B3GAT2Q9NPZ5 323 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 B3GAT1Q9P2W7 334 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 POFUT2Q9Y2G5 429 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 CACNG2Q9Y698 323 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 PLXNB1O43157 2135 aa9.79□□□□□ -0.84
RNF4-216ENST00000511859 PRAMEF27A3QJZ7 478 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 PIN1P1O15428 100 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 GPANK1O95872 356 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 DBIP07108 87 aaKnown RBP9.78□□□□□ -0.84
RNF4-216ENST00000511859 TROVE2P10155 538 aaKnown RBP eCLIP9.78□□□□□ -0.84
RNF4-216ENST00000511859 SELEP16581 610 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 ACAA2P42765 397 aaKnown RBP9.78□□□□□ -0.84
RNF4-216ENST00000511859 NME5P56597 212 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 RAB39AQ14964 217 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 PDCD1Q15116 288 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 EPGNQ6UW88 154 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 LRRC74BQ6ZQY2 392 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 C20orf196Q8IYI0 205 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 CLECL1Q8IZS7 167 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 TMEM123Q8N131 208 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 CADM2Q8N3J6 435 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 CPEB3Q8NE35 698 aaKnown RBP9.78□□□□□ -0.84
RNF4-216ENST00000511859 OR52E2Q8NGJ4 325 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 TSPAN32Q96QS1 320 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 SLC30A2Q9BRI3 323 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 SLC38A1Q9H2H9 487 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms