RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 ATP1B3P54709 279 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 BACE1P56817 501 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ERVFC1-1P60608 527 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 RPS26P62854 115 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 HBA1P69905 142 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 SRSF4Q08170 494 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 HERPUD1Q15011 391 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 RAB35Q15286 201 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 GXYLT1Q4G148 440 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 STPG1Q5TH74 334 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 LEMD1Q68G75 181 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 OR2T2Q6IF00 324 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 EIF5AL1Q6IS14 154 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 FAM129CQ86XR2 697 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 LINC01465Q8N7H1 131 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 FRMD1Q8N878 549 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 BBS1Q8NFJ9 593 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 OR2L3Q8NG85 312 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 OR52N4Q8NGI2 321 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 OR13C5Q8NGS8 318 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 OR6N1Q8NGY5 312 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ABHD4Q8TB40 342 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 RNASEH2CQ8TDP1 164 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 RSC1A1Q92681 617 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 FAAP24Q9BTP7 215 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 CHST6Q9GZX3 395 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 RAB33BQ9H082 229 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 SLC25A31Q9H0C2 315 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 EGLN3Q9H6Z9 239 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 CWH43Q9H720 699 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 APMAPQ9HDC9 416 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 SERINC1Q9NRX5 453 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 GPR173Q9NS66 373 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ZNF346Q9UL40 294 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 NOD1Q9Y239 953 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 KCNE1BA0A087WTH5 132 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 ACOT7O00154 380 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 NDUFS8O00217 210 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 NME6O75414 186 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 EPHX1P07099 455 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 H1F0P07305 194 aaKnown RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 PGAM2P15259 253 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 CD22P20273 847 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 NSG1P42857 185 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 AFF3P51826 1226 aaKnown RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 FKBP1AP62942 108 aaKnown RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 MC1RQ01726 317 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 PRKCZQ05513 592 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 ARHGAP1Q07960 439 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 HAGHQ16775 308 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 TMEM95Q3KNT9 176 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 PRRT3Q5FWE3 981 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 IER5LQ5T953 404 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 NBPF12Q5TAG4 269 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 TMPPEQ6ZT21 453 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 PLPPR4Q7Z2D5 763 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 GCNT2Q8N0V5 402 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 CFAP52Q8N1V2 620 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 OR4C16Q8NGL9 310 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 OR4C6Q8NH72 309 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 SLC7A13Q8TCU3 470 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 TMEM40Q8WWA1 233 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 ASB17Q8WXJ9 295 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 OTUB2Q96DC9 234 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 ARSGQ96EG1 525 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 ZNF2Q9BSG1 426 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 OR2AG1Q9H205 316 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 TRIM36Q9NQ86 728 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 MARCH5Q9NX47 278 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 ADAM18Q9Y3Q7 739 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 DNAH14Q0VDD8 3507 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 YLPM1P49750 1951 aaKnown RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 A0A0B4J2A0 478 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 SMAD9O15198 467 aaKnown RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 FLRT2O43155 660 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 KCNAB3O43448 404 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 HBP1O60381 514 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 SMPD2O60906 423 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 PMS2P2O95744 297 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 PCCBP05166 539 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 ANXA5P08758 320 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 IRF2P14316 349 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 GABRR1P24046 479 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 IDH3GP51553 393 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 SLC37A1P57057 533 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 FOXK1P85037 733 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 PIN1Q13526 163 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 OR5I1Q13606 314 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 MOGAT2Q3SYC2 334 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 UBXN11Q5T124 520 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 SSX7Q7RTT5 188 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 MRPL52Q86TS9 123 aaKnown RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 ARL14Q8N4G2 192 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 FAM160A2Q8N612 972 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-208ENST00000511604 ZBTB2Q8N680 514 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 TEX26Q8N6G2 289 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 LMNTD1Q8N9Z9 388 aa6.69□□□□□ -1.34
CPNE4-208ENST00000511604 KLHDC9Q8NEP7 349 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms