RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 RABL3Q5HYI8 236 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 MBNL2Q5VZF2 373 aaKnown RBP7.5□□□□□ -1.21
PDPN-209ENST00000510906 FAM91A1Q658Y4 838 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 C5orf46Q6UWT4 87 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 CD300LDQ6UXZ3 194 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 DTX2Q86UW9 622 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 RBM45Q8IUH3 476 aaKnown RBP7.5□□□□□ -1.21
PDPN-209ENST00000510906 OR4D11Q8NGI4 311 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 OR6T1Q8NGN1 323 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 OR1K1Q8NGR3 316 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 OR10A6Q8NH74 314 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 SLC38A4Q969I6 547 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 TAMM41Q96BW9 452 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 TRMT61AQ96FX7 289 aaKnown RBP7.5□□□□□ -1.21
PDPN-209ENST00000510906 RADILQ96JH8 1075 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 OXGR1Q96P68 337 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 MCHR1Q99705 422 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 ARHGDIGQ99819 225 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 SELENONQ9NZV5 590 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 POU2F3Q9UKI9 436 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 MGAT4BQ9UQ53 548 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 COL6A5A8TX70 2615 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 A0A0A6YYJ9 748 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 SCO2A0A1W2PP80 73 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 OR6C65A6NJZ3 312 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 CPSF4LA6NMK7 179 aaKnown RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 ATP6V1G2-DDX39BF2Z307 99 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 FXYD1O00168 92 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 TRAF3IP2O43734 574 aaPredicted RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 ZNF432O94892 652 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 HPRP00739 348 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 BGLAPP02818 100 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 THY1P04216 161 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 VIMP08670 466 aaKnown RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 CELA3BP08861 270 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 TROVE2P10155 538 aaKnown RBP eCLIP7.49□□□□□ -1.21
PDPN-209ENST00000510906 APEX1P27695 318 aaKnown RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 TTKP33981 857 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 PCGF2P35227 344 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 ACVR1BP36896 505 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 GZMMP51124 257 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 ARFIP2P53365 341 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 CRYBA2P53672 197 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 PRPS1P60891 318 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 TUBA1BP68363 451 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 TUBA4AP68366 448 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 IL1RL1Q01638 556 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 ROR2Q01974 943 aaKnown RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 KLF10Q13118 480 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 C1DQ13901 141 aaKnown RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 VEZF1Q14119 521 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 CLEC12BQ2HXU8 276 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 VMACQ2NL98 169 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 TRMT5Q32P41 509 aaKnown RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 TBRG1Q3YBR2 411 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 C11orf71Q6IPW1 123 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 NANOGP8Q6NSW7 305 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 KLHL24Q6TFL4 600 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 WDR88Q6ZMY6 472 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 TUBA1AQ71U36 451 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 H1FNTQ75WM6 255 aaPredicted RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 ABHD12BQ7Z5M8 362 aaPredicted RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 PATL1Q86TB9 770 aaKnown RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 RANBP3LQ86VV4 465 aaPredicted RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 MAPK1IP1LQ8NDC0 245 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 BHLHE22Q8NFJ8 381 aaPredicted RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 VANGL1Q8TAA9 524 aaPredicted RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 BCL2L2Q92843 193 aaPredicted RBP7.49□□□□□ -1.21
PDPN-209ENST00000510906 SLC41A3Q96GZ6 507 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 BOD1Q96IK1 185 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 MOGAT1Q96PD6 335 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 OR2M2Q96R28 347 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 EPYCQ99645 322 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 DHRS9Q9BPW9 319 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 CACNG6Q9BXT2 260 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 LINC00470Q9BZP3 86 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 NELFAQ9H3P2 528 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 EVA1AQ9H8M9 152 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 NANOGQ9H9S0 305 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 SAR1AQ9NR31 198 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 FAIMQ9NVQ4 179 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 USP22Q9UPT9 525 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 RCE1Q9Y256 329 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 B3GALT5Q9Y2C3 310 aa7.49□□□□□ -1.21
PDPN-209ENST00000510906 CUBNO60494 3623 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 TLN2Q9Y4G6 2542 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 PKD1L1Q8TDX9 2849 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 IGHV1-18A0A0C4DH31 117 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 LOC100653049A0A140TA62 436 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 LOC102725191A0A1B0GVB3 256 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 FAM171A2A8MVW0 826 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 VSTM5A8MXK1 200 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 MS4A18H0YCH9 400 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 MRASO14807 208 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 FMO6PO60774 539 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 SLC43A1O75387 559 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 KRT34O76011 436 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 LYPD3O95274 346 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 HLA-DOBP13765 273 aa7.48□□□□□ -1.21
PDPN-209ENST00000510906 NQO1P15559 274 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms