RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 CEBPGP53567 150 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 EMP2P54851 167 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 NAPAP54920 295 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 GNB2P62879 340 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 GLO1Q04760 184 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 PSG7Q13046 419 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 STX3Q13277 289 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 ELAVL3Q14576 367 aaKnown RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 TPSAB1Q15661 275 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SGCAQ16586 387 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 KYAT1Q16773 422 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SLC5A12Q1EHB4 618 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 C6orf226Q5I0X4 101 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 PYHIN1Q6K0P9 492 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 RHBDD2Q6NTF9 364 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 RNASEKQ6P5S7 137 aaKnown RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 SLC39A4Q6P5W5 647 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 TMEM107Q6UX40 140 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 UTS2BQ765I0 119 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 FAM122BQ7Z309 247 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 LHFPL4Q7Z7J7 247 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SLC22A16Q86VW1 577 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 ZNF677Q86XU0 584 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 CBWD2Q8IUF1 395 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 LRRC17Q8N6Y2 441 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 FAM86B1Q8N7N1 296 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 FAM83FQ8NEG4 500 aaPredicted RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 RHEBL1Q8TAI7 183 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 RAET1EQ8TD07 263 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SPRYD4Q8WW59 207 aaPredicted RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 CACNG8Q8WXS5 425 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 PIGCQ92535 297 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 ELMO1Q92556 727 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 PHYHIPQ92561 330 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 ESR2Q92731 530 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 HAS2Q92819 552 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 GGHQ92820 318 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SLC38A4Q969I6 547 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SLC25A36Q96CQ1 311 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 OTUB2Q96DC9 234 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 VPS35Q96QK1 796 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 OMDQ99983 421 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 CBWD1Q9BRT8 395 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 CENPKQ9BS16 269 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 C20orf24Q9BUV8 137 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 TM6SF2Q9BZW4 377 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 OPN3Q9H1Y3 402 aaPredicted RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 ELOVL6Q9H5J4 265 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 ANKRA2Q9H9E1 313 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 LYRM4Q9HD34 91 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 CCNB1IP1Q9NPC3 277 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 MS4A12Q9NXJ0 267 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 PLEK2Q9NYT0 353 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 APOBEC3BQ9UH17 382 aaKnown RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 ZNF639Q9UID6 485 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 ZNF229Q9UJW7 825 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 VANGL2Q9ULK5 521 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 B9D1Q9UPM9 204 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 PLLPQ9Y342 182 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 OVOS2A0A0J9YW53 1432 aa3.09□□□□□ -1.92
NUP54-209ENST00000510569 OVOS2Q6IE36 1432 aa3.09□□□□□ -1.92
NUP54-209ENST00000510569 EDC4Q6P2E9 1401 aaKnown RBP3.09□□□□□ -1.92
NUP54-209ENST00000510569 TRIOBPQ9H2D6 2365 aa3.09□□□□□ -1.92
NUP54-209ENST00000510569 TRBV11-1A0A0K0K1C0 115 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 A8MUA0 341 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 A8MX80 341 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 NPIPA2E9PIF3 369 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 SDHDO14521 159 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 TOR1AO14656 332 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 AIM2O14862 343 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 TIMM8AO60220 97 aaPredicted RBP3.08□□□□□ -1.92
NUP54-209ENST00000510569 SCGNO76038 276 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 H6PDO95479 791 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 ASS1P00966 412 aaKnown RBP3.08□□□□□ -1.92
NUP54-209ENST00000510569 IGHV3-9P01782 118 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 SERPIND1P05546 499 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 SFTPBP07988 381 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 ANXA5P08758 320 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 POLR2EP19388 210 aaKnown RBP3.08□□□□□ -1.92
NUP54-209ENST00000510569 UQCRC2P22695 453 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 CDKN2CP42773 168 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 CDK16Q00536 496 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 PAX5Q02548 391 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 IFFO1Q0D2I5 559 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 BST2Q10589 180 aaKnown RBP3.08□□□□□ -1.92
NUP54-209ENST00000510569 SLAMF1Q13291 335 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 SLC10A1Q14973 349 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 ACKR1Q16570 336 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 GOLGA7BQ2TAP0 167 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 COQ5Q5HYK3 327 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 DCAF12Q5T6F0 453 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 LGSNQ5TDP6 509 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 C1orf189Q5VU69 101 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 CENPUQ71F23 418 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 SLC35D2Q76EJ3 337 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 ARCQ7LC44 396 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 GABRG1Q8N1C3 465 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 RNF175Q8N4F7 328 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 Q8N9G6 341 aaPredicted RBP3.08□□□□□ -1.92
NUP54-209ENST00000510569 SYT14Q8NB59 555 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms