RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TPOP07202 933 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 ADRA2CP18825 462 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 DNASE1P24855 282 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 ARL4DP49703 201 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 DEFB133Q30KQ1 61 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 ZNF227Q86WZ6 799 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 MVB12AQ96EY5 273 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 ELF4Q99607 663 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 RAB33BQ9H082 229 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 OR10A4Q9H209 315 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 DLL4Q9NR61 685 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 B3GNT2Q9NY97 397 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 FLVCR2Q9UPI3 526 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 EML5Q05BV3 1969 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 IGKV3D-11A0A0A0MRZ8 115 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 ANKRD20A5PA0PJZ0 165 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 CDC40O60508 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 HPXP02790 462 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 MAS1P04201 325 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 SDHBP21912 280 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 MNDAP41218 407 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 P2RX1P51575 399 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 CAMK2DQ13557 499 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 COL28A1Q2UY09 1125 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 TEX261Q6UWH6 196 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 C17orf82Q86X59 251 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 PM20D2Q8IYS1 436 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 KLHDC3Q9BQ90 382 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 ZNF436Q9C0F3 470 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 U3KQ87 197 aa16.25■□□□□ 0.19
CCHCR1-228ENST00000509552 A0A1B0GTH9 108 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 A0A1W2PR77 199 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 EIF4E2O60573 245 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 TPPPO94811 219 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 BGLAPP02818 100 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 PGCP20142 388 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 VEGFCP49767 419 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 NR0B1P51843 470 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 SCAND1P57086 179 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 TAS2R20P59543 309 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 ZP2Q05996 745 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 OLFML2AQ68BL7 652 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 MAMDC2Q7Z304 686 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 MARCH3Q86UD3 253 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 DNAAF1Q8NEP3 725 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 METTL21AQ8WXB1 218 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 THRSPQ92748 146 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 TMEM106AQ96A25 262 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 NUDT9Q9BW91 350 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 TBL1XR1Q9BZK7 514 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 RTN4RQ9BZR6 473 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 NRSN2Q9GZP1 204 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 ELF5Q9UKW6 265 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 TRBV5-7A0A0A0MS05 114 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 A0A1B0GUH1 482 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 CDC14CA4D256 554 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 C11orf98E9PRG8 122 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 HLA-DQA2P01906 255 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 GP1BBP13224 206 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 RPS27P42677 84 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 OR3A3P47888 321 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 PLCXD2Q0VAA5 305 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 EBPQ15125 230 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 TMEM255AQ5JRV8 349 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 PIGKQ92643 395 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 DAZLQ92904 295 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 NXPE2Q96DL1 559 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 DCBLD2Q96PD2 775 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 NOX3Q9HBY0 568 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 TAS2R5Q9NYW4 299 aa16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 DHCR7Q9UBM7 475 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-228ENST00000509552 A0A1W2PQD3 144 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 ARPC1BO15143 372 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 TOMM34Q15785 309 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 C14orf28Q4W4Y0 310 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 STPG1Q5TH74 334 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 OTOSQ8NHW6 89 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 TTC9Q92623 222 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 SLC25A36Q96CQ1 311 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 EIF3KQ9UBQ5 218 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 COPS7AQ9UBW8 275 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 STEAP1Q9UHE8 339 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 NPTNQ9Y639 398 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 BRWD1Q9NSI6 2320 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 TRAV8-7A0A075B6U6 113 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 METTL12A8MUP2 240 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 ALG1L2C9J202 215 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 TNFRSF10AO00220 468 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 MT-ATP6P00846 226 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 CENPAP49450 140 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 EPHA4P54764 986 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 ZP1P60852 638 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 HNRNPKP61978 463 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 HSD11B2P80365 405 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 ODF4Q2M2E3 257 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 ZNF680Q8NEM1 530 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 DNAJA3Q96EY1 480 aa16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 CLEC4MQ9H2X3 399 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-228ENST00000509552 CDV3Q9UKY7 258 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms