RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TAS2R5Q9NYW4 299 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 KCNS2Q9ULS6 477 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 SLC7A7Q9UM01 511 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 A0A0G2JND7 137 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 LOC100289279A0A1B0GTE1 492 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 TRAPPC13A5PLN9 417 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 CH25HO95992 272 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 ASAH2BP0C7U1 165 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 DAOP14920 347 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 GIPRP48546 466 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 PTDSS1P48651 473 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 ZP4Q12836 540 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 VMACQ2NL98 169 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 IQCCQ4KMZ1 466 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 IL17RELQ6ZVW7 336 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 SLC35D2Q76EJ3 337 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 SNX32Q86XE0 403 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF584Q8IVC4 421 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 LRRC17Q8N6Y2 441 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF540Q8NDQ6 660 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 OR6X1Q8NH79 312 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 NEU4Q8WWR8 484 aaPredicted RBP11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 TMEM54Q969K7 222 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 MRPL24Q96A35 216 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 MRPL37Q9BZE1 423 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 DYNLRB1Q9NP97 96 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF229Q9UJW7 825 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 CMAHPQ9Y471 501 aa11.21□□□□□ -0.61
HMGCS1-205ENST00000508319 SH3PXD2BA1X283 911 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 LRP5LA4QPB2 252 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 VSTM5A8MXK1 200 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 FXYD1O00168 92 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 FBP2O00757 339 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 RNF13O43567 381 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 LILRA1O75019 489 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 UBL3O95164 117 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 OR6A2O95222 327 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 RAB36O95755 333 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 ADRA2AP08913 450 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 TACSTD2P09758 323 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 PGA4P0DJD7 388 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 PGA3P0DJD8 388 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 SRD5A1P18405 259 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 IL2RGP31785 369 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 EVX1P49640 407 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 RAB1AP62820 205 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 RIN1Q13671 783 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 MELKQ14680 651 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 FXNQ16595 210 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 FAM120AOSQ5T036 256 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 INTS11Q5TA45 600 aaKnown RBP11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 TTC33Q6PID6 262 aaPredicted RBP11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 CCDC80Q76M96 950 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 HDXQ7Z353 690 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 ZNF786Q8N393 782 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 FGFBP3Q8TAT2 258 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 ZNF566Q969W8 418 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 MPP4Q96JB8 637 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 PRSS27Q9BQR3 290 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 SLC19A3Q9BZV2 496 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 TPK1Q9H3S4 243 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 DENND2DQ9H6A0 471 aaPredicted RBP11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 VIPAS39Q9H9C1 493 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 MEPEQ9NQ76 525 aaPredicted RBP11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 NANSQ9NR45 359 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 GLTPQ9NZD2 209 aa11.2□□□□□ -0.62
HMGCS1-205ENST00000508319 SYNGR3O43761 229 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 PATE4P0C8F1 98 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 GLRXP35754 106 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 RAB39AQ14964 217 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 RABL3Q5HYI8 236 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 METTL21CQ5VZV1 264 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 LRFN4Q6PJG9 635 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 PIWIL3Q7Z3Z3 882 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 CALHM3Q86XJ0 350 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 SKA3Q8IX90 412 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 SLC22A24Q8N4F4 322 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 UBASH3BQ8TF42 649 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 RASSF5Q8WWW0 418 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 SLC25A44Q96H78 314 aaPredicted RBP11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 SYT3Q9BQG1 590 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 TMEM120AQ9BXJ8 343 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 TMEM38BQ9NVV0 291 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 MYEF2Q9P2K5 600 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 FBXL3Q9UKT7 428 aa11.19□□□□□ -0.62
HMGCS1-205ENST00000508319 LYNX1G3V0Z9 82 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 M0R233 179 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 GPR37O15354 613 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 DHHO43323 396 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 SASH3O75995 380 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 TGFAP01135 160 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 SERPINA5P05154 406 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 OR8G3PP0DMU2 310 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 LYNX1P0DP58 116 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 H2AFXP16104 143 aaPredicted RBP11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 THBS2P35442 1172 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 CHN2P52757 468 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms