RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 OR10K1Q8NGX5 313 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 C16orf78Q8WTQ4 265 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 TFAP2CQ92754 450 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 EME1Q96AY2 570 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 UPRTQ96BW1 309 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 NUS1Q96E22 293 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 S1PR3Q99500 378 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 ATP5SQ99766 215 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 CDCA4Q9BXL8 241 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 DEFB129Q9H1M3 183 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 POPDC2Q9HBU9 364 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 RETNQ9HD89 108 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 FGF21Q9NSA1 209 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 IMPAD1Q9NX62 359 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 CISD1Q9NZ45 108 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 OR52A1Q9UKL2 312 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 TRPM3Q9HCF6 1732 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 A1L4Q6 167 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 GRID2IPA4D2P6 1211 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 J3QLI3 93 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 PSTPIP1O43586 416 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 RNASEH1O60930 286 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 OR8U9P0C7N5 309 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 MGMTP16455 207 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 ADORA1P30542 326 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 CLDN12P56749 244 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 OR2B8PP59922 312 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 ST3GAL1Q11201 340 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 PLA2G7Q13093 441 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 MYBPHQ13203 477 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 FAM214AQ32MH5 1076 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 LCN10Q6JVE6 187 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 SPACA3Q8IXA5 215 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF444Q8N0Y2 327 aaPredicted RBP6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 SLC39A11Q8N1S5 342 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 LYPD6BQ8NI32 183 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 GRAMD2BQ96HH9 432 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 UHRF2Q96PU4 802 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 TLNRD1Q9H1K6 362 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 DHX35Q9H5Z1 703 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 WDR41Q9HAD4 459 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 C6orf50Q9HD87 102 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 TIGARQ9NQ88 270 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 CLN6Q9NWW5 311 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 NPAP1Q9NZP6 1156 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 TCF19Q9Y242 345 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 TP53TG5Q9Y2B4 290 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 MST1RQ04912 1400 aa6.67□□□□□ -1.34
PDGFRA-206ENST00000508170 A0A087WWV3 80 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 KIR2DL5BA0A0G2JN68 375 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 KIR2DL5BA0A0G2JPC4 375 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 CA1P00915 261 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 FBP1P09467 338 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 FAM228BP0C875 321 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 DAOP14920 347 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 DPEP1P16444 411 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 FUT3P21217 361 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 CA4P22748 312 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 RAB13P51153 203 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 CHN2P52757 468 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 AP2S1P53680 142 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 WDR5P61964 334 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 SEMG2Q02383 582 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 DMKNQ6E0U4 476 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 ELP2Q6IA86 826 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 SLC25A47Q6Q0C1 308 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 CLNKQ7Z7G1 428 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 TMEM135Q86UB9 458 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 KIR2DL5AQ8N109 375 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 MTURNQ8N3F0 131 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 SPATA6LQ8N4H0 392 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 TMEM161BQ8NDZ6 487 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 OR5L1Q8NGL2 311 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 OR51A7Q8NH64 312 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 KIR2DL5BQ8NHK3 375 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 ACER1Q8TDN7 264 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 BADQ92934 168 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 AIF1LQ9BQI0 150 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 HCAR1Q9BXC0 346 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 NAT10Q9H0A0 1025 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF703Q9H7S9 590 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 TMBIM4Q9HC24 238 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 TECRQ9NZ01 308 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 SLC17A4Q9Y2C5 497 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 ATP6AP2A0A1C7CYW4 349 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 A0A1W2PR80 420 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 PQLC2LA1A4F0 135 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 G3V4G9 280 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 CCL24O00175 119 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 ACOT8O14734 319 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 SNX3O60493 162 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 STC2O76061 302 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 FGF19O95750 216 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 HPP00738 406 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 IGKV5-2P06315 115 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 ADORA3P0DMS8 318 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 SNHG28P0DPA3 235 aa6.66□□□□□ -1.34
PDGFRA-206ENST00000508170 IRF2P14316 349 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms