RNA–Protein interactions for RNA: ENST00000508130.5

SLF1-207, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 1,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-207ENST00000508130 HSPB3Q12988 150 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 KIAA0040Q15053 153 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 ACKR1Q16570 336 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 GSTA3Q16772 222 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 ANXA2RQ3ZCQ2 193 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 SLC9B1Q4ZJI4 515 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 RFTN2Q52LD8 501 aaPredicted RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 ARL13AQ5H913 290 aaPredicted RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 C9orf152Q5JTZ5 239 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 HHATQ5VTY9 493 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 AP1ARQ63HQ0 302 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 HBMQ6B0K9 141 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 OR5M10Q6IEU7 315 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 OR7E24Q6IFN5 339 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 KRT80Q6KB66 452 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 TMEM107Q6UX40 140 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 SH2D5Q6ZV89 423 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 ABHD12BQ7Z5M8 362 aaPredicted RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 BIVMQ86UB2 503 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 MARCH3Q86UD3 253 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 CDC20BQ86Y33 519 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 TGIF2LYQ8IUE0 185 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 ZNF440Q8IYI8 595 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 PRR22Q8IZ63 422 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 LRRC75A-AS1Q8N1F1 130 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 GTPBP8Q8N3Z3 284 aaPredicted RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 MARVELD2Q8N4S9 558 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 DPP10Q8N608 796 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 COX18Q8N8Q8 333 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 FADS6Q8N9I5 356 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 BANPQ8N9N5 519 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 FNDC5Q8NAU1 212 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 OR2M3Q8NG83 312 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 OR7G2Q8NG99 324 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 OR6K3Q8NGY3 331 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 FBXO30Q8TB52 745 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 FAM110BQ8TC76 370 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 SFXN5Q8TD22 340 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 CPNE4Q96A23 557 aaPredicted RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 FAM162AQ96A26 154 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 EFHD2Q96C19 240 aaPredicted RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 TUBGCP3Q96CW5 907 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 RNFT2Q96EX2 444 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 C11orf24Q96F05 449 aaPredicted RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 MS4A4EQ96PG1 132 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 RAB3IPQ96QF0 476 aaPredicted RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 NODALQ96S42 347 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 TUBA1CQ9BQE3 449 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 SRSF8Q9BRL6 282 aaKnown RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 DPY30Q9C005 99 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 GLIPR2Q9H4G4 154 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 ESRP2Q9H6T0 727 aaKnown RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 RMND5AQ9H871 391 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 RNF122Q9H9V4 155 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 SCPEP1Q9HB40 452 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 SPAG4Q9NPE6 437 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.12□□□□□ -1.91
SLF1-207ENST00000508130 FAIMQ9NVQ4 179 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 NKIRAS1Q9NYS0 192 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 TAS2R3Q9NYW6 316 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 CALML5Q9NZT1 146 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 MED11Q9P086 117 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 EMC3Q9P0I2 261 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 KLHL9Q9P2J3 617 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 SPRR3Q9UBC9 169 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 TRAPPC4Q9Y296 219 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 SLC35A3Q9Y2D2 325 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 RPH3AQ9Y2J0 694 aaPredicted RBP3.12□□□□□ -1.91
SLF1-207ENST00000508130 ZNF337Q9Y3M9 751 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 ADAM18Q9Y3Q7 739 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 FAM215AQ9Y5M1 114 aa3.12□□□□□ -1.91
SLF1-207ENST00000508130 NIPBLQ6KC79 2804 aaeCLIP3.12□□□□□ -1.91
SLF1-207ENST00000508130 MAP1AP78559 2803 aaPredicted RBP3.11□□□□□ -1.91
SLF1-207ENST00000508130 POLEQ07864 2286 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 A0A0G2JMM0 328 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 A0A1W2PNV4 684 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 A0A1W2PPB8 328 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 A0A1W2PRS3 328 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 OR2M5A3KFT3 312 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 SMIM30A4D0T7 59 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 AGAP5A6NIR3 686 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 KIR3DP1A8MWS1 328 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 C19orf84I3L1E1 186 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 UBFD1O14562 309 aaKnown RBP3.11□□□□□ -1.91
SLF1-207ENST00000508130 ZNF195O14628 629 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 LSM1O15116 133 aaKnown RBP3.11□□□□□ -1.91
SLF1-207ENST00000508130 ZNF264O43296 627 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 SPRY3O43610 288 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 HCRTR2O43614 444 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 SCO2O43819 266 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 ZNF354AO60765 605 aaPredicted RBP3.11□□□□□ -1.91
SLF1-207ENST00000508130 HNRNPCL1O60812 293 aaKnown RBP3.11□□□□□ -1.91
SLF1-207ENST00000508130 ENTPD5O75356 428 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 TPPPO94811 219 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 KCNK2O95069 426 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 SERPINE1P05121 402 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 HMGN2P05204 90 aaKnown RBP3.11□□□□□ -1.91
SLF1-207ENST00000508130 BPGMP07738 259 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 LINGO3P0C6S8 592 aa3.11□□□□□ -1.91
SLF1-207ENST00000508130 CCDC159P0C7I6 412 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms