RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 RMND5AQ9H871 391 aa11.81□□□□□ -0.52
DDR1-260ENST00000507533 HINT3Q9NQE9 182 aaKnown RBP11.81□□□□□ -0.52
DDR1-260ENST00000507533 RCE1Q9Y256 329 aa11.81□□□□□ -0.52
DDR1-260ENST00000507533 DSPPQ9NZW4 1301 aa11.81□□□□□ -0.52
DDR1-260ENST00000507533 A0A1B0GUS0 222 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 CFAP73A6NFT4 308 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 A8MVM7 634 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 ZNF99A8MXY4 864 aaPredicted RBP11.8□□□□□ -0.52
DDR1-260ENST00000507533 FRS3O43559 492 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 ZNF43P17038 809 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 LSP1P33241 339 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 HPCAP84074 193 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 FUT5Q11128 374 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 EPS8Q12929 822 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 GPAT3Q53EU6 434 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 AGKQ53H12 422 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 C16orf87Q6PH81 154 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 BRICD5Q6PL45 260 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 CMIPQ8IY22 773 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 TRIML2Q8N7C3 387 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 DEFB108BQ8NET1 73 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 VPS33AQ96AX1 596 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 SPDL1Q96EA4 605 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 ITCHQ96J02 903 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 ZNF75AQ96N20 296 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 CITED1Q99966 193 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 FAM53CQ9NYF3 392 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 CCDC167Q9P0B6 97 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 GPR160Q9UJ42 338 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 AUP1Q9Y679 476 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 CACNG2Q9Y698 323 aa11.8□□□□□ -0.52
DDR1-260ENST00000507533 PPIAL4EA0A075B759 164 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 PPIAL4CA0A0B4J2A2 164 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 GMNCA6NCL1 334 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 CCDC154A6NI56 674 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 PPIAL4DF5H284 164 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 RFXANKO14593 260 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 TIMM23O14925 209 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 TPD52L2O43399 206 aaKnown RBP11.79□□□□□ -0.52
DDR1-260ENST00000507533 TRAF3IP2O43734 574 aaPredicted RBP11.79□□□□□ -0.52
DDR1-260ENST00000507533 CLPTM1O96005 669 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 TFPTP0C1Z6 253 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 PPIAL4FP0DN26 164 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 CDKN2CP42773 168 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 PTDSS1P48651 473 aaKnown RBP11.79□□□□□ -0.52
DDR1-260ENST00000507533 SELENOVP59797 346 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 GNGT1P63211 74 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 HFEQ30201 348 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 C1orf140Q5VVS0 124 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 ZNF621Q6ZSS3 439 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 USP51Q70EK9 711 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 RHOUQ7L0Q8 258 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 PIK3C3Q8NEB9 887 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 ST7LQ8TDW4 575 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 SNX33Q8WV41 574 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 C10orf82Q8WW14 230 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 RBM4BQ9BQ04 359 aaKnown RBP11.79□□□□□ -0.52
DDR1-260ENST00000507533 SLC35A5Q9BS91 424 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 MS4A7Q9GZW8 240 aaPredicted RBP11.79□□□□□ -0.52
DDR1-260ENST00000507533 NSRP1Q9H0G5 558 aaKnown RBP11.79□□□□□ -0.52
DDR1-260ENST00000507533 BEX1Q9HBH7 125 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 MMP26Q9NRE1 261 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 DECR2Q9NUI1 292 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 MRGBPQ9NV56 204 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 NKIRAS2Q9NYR9 191 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 SLC7A8Q9UHI5 535 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 LEF1Q9UJU2 399 aaPredicted RBP11.79□□□□□ -0.52
DDR1-260ENST00000507533 WNK2Q9Y3S1 2297 aa11.79□□□□□ -0.52
DDR1-260ENST00000507533 PRAMEF27A3QJZ7 478 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 M0R3G1 203 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 FOXH1O75593 365 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 RAB36O95755 333 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 GPANK1O95872 356 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 ZCCHC18P0CG32 403 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 PNMTP11086 282 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 DRD4P21917 467 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 CHI3L1P36222 383 aaPredicted RBP11.78□□□□□ -0.52
DDR1-260ENST00000507533 MTNR1AP48039 350 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 GIPRP48546 466 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 PHYHD1Q5SRE7 291 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 RGS7BPQ6MZT1 257 aaPredicted RBP11.78□□□□□ -0.52
DDR1-260ENST00000507533 GTF2H4Q92759 462 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 SLC25A36Q96CQ1 311 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 NEURL3Q96EH8 262 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 TSPAN32Q96QS1 320 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 ELAC2Q9BQ52 826 aaKnown RBP11.78□□□□□ -0.52
DDR1-260ENST00000507533 UBAP1Q9NZ09 502 aa11.78□□□□□ -0.52
DDR1-260ENST00000507533 PURGQ9UJV8 347 aaKnown RBP11.78□□□□□ -0.52
DDR1-260ENST00000507533 WNK1Q9H4A3 2382 aa11.77□□□□□ -0.52
DDR1-260ENST00000507533 ISPDA4D126 451 aa11.77□□□□□ -0.53
DDR1-260ENST00000507533 AGAP5A6NIR3 686 aa11.77□□□□□ -0.53
DDR1-260ENST00000507533 ANP32DO95626 131 aa11.77□□□□□ -0.53
DDR1-260ENST00000507533 KRT75O95678 551 aa11.77□□□□□ -0.53
DDR1-260ENST00000507533 KLF3P57682 345 aaPredicted RBP11.77□□□□□ -0.53
DDR1-260ENST00000507533 RAB1AP62820 205 aa11.77□□□□□ -0.53
DDR1-260ENST00000507533 TXNL4AP83876 142 aaKnown RBP11.77□□□□□ -0.53
DDR1-260ENST00000507533 ZNF154Q13106 437 aa11.77□□□□□ -0.53
DDR1-260ENST00000507533 C1DQ13901 141 aaKnown RBP11.77□□□□□ -0.53
DDR1-260ENST00000507533 GNA13Q14344 377 aa11.77□□□□□ -0.53
DDR1-260ENST00000507533 RAB39AQ14964 217 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms