RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ZNF610Q8N9Z0 462 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 NOXO1Q8NFA2 376 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 OR2T33Q8NG76 320 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF519Q8TB69 540 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 FANK1Q8TC84 345 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 SLCO4A1Q96BD0 722 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 KCNK17Q96T54 332 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 C9orf16Q9BUW7 83 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 POLDIP3Q9BY77 421 aaKnown RBP7.47□□□□□ -1.21
PDGFC-205ENST00000506880 UCK2Q9BZX2 261 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 DCLRE1BQ9H816 532 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 MCCC2Q9HCC0 563 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 USE1Q9NZ43 259 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 GLTPQ9NZD2 209 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 VSX1Q9NZR4 365 aaPredicted RBP7.47□□□□□ -1.21
PDGFC-205ENST00000506880 ORC6Q9Y5N6 252 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 V9GYQ6 96 aa7.47□□□□□ -1.21
PDGFC-205ENST00000506880 CENPEQ02224 2701 aa7.46□□□□□ -1.21
PDGFC-205ENST00000506880 CADP27708 2225 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 UNC79Q9P2D8 2635 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 IGHV3-15A0A0B4J1V0 119 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 FAM221AA4D161 298 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 PRSS37A4D1T9 235 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 OR5H1A6NKK0 313 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF814B7Z6K7 855 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 PRSS44E7EML9 344 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 J3QW42 95 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 KPNA4O00629 521 aaPredicted RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 CDC42EP2O14613 210 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 CASKO14936 926 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 RRP9O43818 475 aaKnown RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 HRGP04196 525 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 OSMP13725 252 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 COX6B1P14854 86 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 CRYGSP22914 178 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 TUBG1P23258 451 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 GRK5P34947 590 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 RPL4P36578 427 aaKnown RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 AQP2P41181 271 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 KIR2DL3P43628 341 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 RAD23AP54725 363 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 CLRN1P58418 232 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 CTXN1P60606 82 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 PCBD1P61457 104 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 MRPS34P82930 218 aaKnown RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 IL1RL1Q01638 556 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 KPNB1Q14974 876 aaKnown RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 ACKR1Q16570 336 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 BEX5Q5H9J7 111 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 KDM4DQ6B0I6 523 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 SLC27A4Q6P1M0 643 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 NIPAL3Q6P499 406 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 KLHL17Q6TDP4 642 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 SEZ6L2Q6UXD5 910 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 UNQ6126/PRO20091Q6UXV3 157 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 FOXL2NBQ6ZUU3 175 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 RHOUQ7L0Q8 258 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 BHLHA15Q7RTS1 189 aaPredicted RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 NUFIP2Q7Z417 695 aaKnown RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 EGFL6Q8IUX8 553 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 PQLC1Q8N2U9 271 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 AQP11Q8NBQ7 271 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 OR6N1Q8NGY5 312 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 OR52J3Q8NH60 311 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 TEX47Q8TBZ9 253 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 TRUB1Q8WWH5 349 aaKnown RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF570Q96NI8 536 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF385AQ96PM9 386 aaKnown RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 MYCBPQ99417 103 aaPredicted RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 FEVQ99581 238 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 ULBP2Q9BZM5 246 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 RACGAP1Q9H0H5 632 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 RASSF4Q9H2L5 321 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 OR52D1Q9H346 318 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 FN3KQ9H479 309 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 SLC25A19Q9HC21 320 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 S100A14Q9HCY8 104 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 TUBG2Q9NRH3 451 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 PDP1Q9P0J1 537 aaPredicted RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 KIF17Q9P2E2 1029 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 RHCGQ9UBD6 479 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 PLEKHB1Q9UF11 243 aaPredicted RBP7.46□□□□□ -1.22
PDGFC-205ENST00000506880 FKBP7Q9Y680 259 aa7.46□□□□□ -1.22
PDGFC-205ENST00000506880 CIB4A0PJX0 185 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 SH3D21A4FU49 640 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 FAM90A27PA6NNH2 459 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 H0YJX3 145 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 DHHO43323 396 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 RAMP1O60894 148 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 DIRAS1O95057 198 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 UBL3O95164 117 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 RENP00797 406 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 GASTP01350 101 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 OR8G3PP0DMU2 310 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF23P17027 643 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF3P17036 446 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 PAICSP22234 425 aaKnown RBP7.45□□□□□ -1.22
PDGFC-205ENST00000506880 PTAFRP25105 342 aa7.45□□□□□ -1.22
PDGFC-205ENST00000506880 NOS3P29474 1203 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms