RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 FNDC5Q8NAU1 212 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNRF1Q8ND25 227 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TSTD1Q8NFU3 115 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TTLQ8NG68 377 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 OR4F6Q8NGB9 312 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 OR9A1PQ8NGU1 263 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 OR5K2Q8NHB8 316 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 AGR3Q8TD06 166 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TWIST2Q8WVJ9 160 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SELENOMQ8WWX9 145 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TFGQ92734 400 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 GGHQ92820 318 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CXorf40BQ96DE9 158 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CMTM7Q96FZ5 175 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 MED8Q96G25 268 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 COX14Q96I36 57 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ANKRD27Q96NW4 1050 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 RCHY1Q96PM5 261 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SMIM14Q96QK8 99 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 RAB40CQ96S21 281 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 S1PR3Q99500 378 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CDX2Q99626 313 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 EBF4Q9BQW3 602 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TIMM29Q9BSF4 260 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CHCHD5Q9BSY4 110 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 APOOQ9BUR5 198 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TBC1D10AQ9BXI6 508 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 NMUR2Q9GZQ4 415 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 OR2AG1Q9H205 316 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 VCX3BQ9H321 246 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 WDR55Q9H6Y2 383 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 DCLRE1BQ9H816 532 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 NT5DC2Q9H857 520 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 RMND5AQ9H871 391 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 MOB1AQ9H8S9 216 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 JPT2Q9H910 190 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 GPN1Q9HCN4 374 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 HEBP1Q9NRV9 189 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 DNAJC11Q9NVH1 559 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 C1orf109Q9NX04 203 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TAS2R1Q9NYW7 299 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SPATA7Q9P0W8 599 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ARMCX1Q9P291 453 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ATXN10Q9UBB4 475 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 VPS29Q9UBQ0 182 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CD84Q9UIB8 345 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNF346Q9UL40 294 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNF490Q9ULM2 529 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 MMP17Q9ULZ9 603 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CELA1Q9UNI1 258 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 DUSP12Q9UNI6 340 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 PDE10AQ9Y233 779 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC22A14Q9Y267 594 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ASF1AQ9Y294 204 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC17A4Q9Y2C5 497 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SH3GLB1Q9Y371 365 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ABCA7Q8IZY2 2146 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 DNAH12Q6ZR08 3092 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TRIP11Q15643 1979 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TRGV8A0A0C4DH27 118 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 A0A0U1RQS6 177 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 LOC390937A0A1W2PQ73 354 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR5H15A6NDH6 313 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 C5orf51A6NDU8 294 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PDZK1P1A8MUH7 402 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 LOC730098B7Z3J9 87 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 KRTAP4-16G5E9R7 235 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 MANBAO00462 879 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 FBP2O00757 339 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SDHDO14521 159 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TXNDC9O14530 226 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR7A17O14581 309 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 AIM2O14862 343 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 LSM1O15116 133 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC31A1O15431 190 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CFLARO15519 480 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TAPBPO15533 448 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 LATO43561 262 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 MGRN1O60291 552 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 DFNA5O60443 496 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PEX11AO75192 247 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 MTX2O75431 263 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4F21O95013 312 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SOD1P00441 154 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CAPN1P07384 714 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SBK2P0C263 348 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CT45A8P0DMV1 189 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CT45A9P0DMV2 189 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 C1GALT1C1LP0DN25 315 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CTSEP14091 401 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 GNSP15586 552 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 GABRG2P18507 467 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 GPX3P22352 226 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PPIBP23284 216 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ME2P23368 584 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CMPK1P30085 196 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 HOXA6P31267 233 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SHMT2P34897 504 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CAPGP40121 348 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CASP3P42574 277 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms