RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ATOH1Q92858 354 aaPredicted RBP10.8□□□□□ -0.68
UBE3D-206ENST00000505226 TMEM106AQ96A25 262 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 PFDN2Q9UHV9 154 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 KNL1Q8NG31 2342 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 OIP5O43482 229 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 AKR7A3O95154 331 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 MYOGP15173 224 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 GPR143P51810 404 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 FAM74A1Q5RGS3 127 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 LRRC69Q6ZNQ3 347 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 NAXDQ8IW45 347 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 OR9A4Q8NGU2 314 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 OR6N1Q8NGY5 312 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 OR2G2Q8NGZ5 317 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 PPP1R14AQ96A00 147 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.8□□□□□ -0.68
UBE3D-206ENST00000505226 FANCMQ8IYD8 2048 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 OR10H2O60403 315 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 SDC3O75056 442 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 ANXA2P07355 339 aaKnown RBP10.79□□□□□ -0.68
UBE3D-206ENST00000505226 SLC35E2P0CK97 266 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 CT45A8P0DMV1 189 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 CT45A9P0DMV2 189 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 ETFDHQ16134 617 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 CT45A2Q5DJT8 189 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 LY6G6FQ5SQ64 297 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 ANKRD16Q6P6B7 361 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 TSSK4Q6SA08 328 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 CDC20BQ86Y33 519 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF595Q8IYB9 648 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 LSM14AQ8ND56 463 aaKnown RBP10.79□□□□□ -0.68
UBE3D-206ENST00000505226 DUSP19Q8WTR2 217 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 SLC25A28Q96A46 364 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 RERGQ96A58 199 aaPredicted RBP10.79□□□□□ -0.68
UBE3D-206ENST00000505226 DNAJA3Q96EY1 480 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 SESN1Q9Y6P5 492 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 COL4A2P08572 1712 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 TRAV18A0A075B6X5 111 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 RAD1O60671 282 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 TRIOO75962 3097 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 CSTAP01040 98 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 EGFP01133 1207 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF10P21506 573 aaPredicted RBP10.79□□□□□ -0.68
UBE3D-206ENST00000505226 ACHEP22303 614 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 PRMT2P55345 433 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 ERV3-1Q14264 604 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 DEFB110Q30KQ9 67 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 SLC6A19Q695T7 634 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 C17orf107Q6ZR85 190 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 DPY19L4Q7Z388 723 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF550Q7Z398 422 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 HSD17B13Q7Z5P4 300 aaPredicted RBP10.79□□□□□ -0.68
UBE3D-206ENST00000505226 MARC2Q969Z3 335 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 GPX7Q96SL4 187 aaPredicted RBP10.79□□□□□ -0.68
UBE3D-206ENST00000505226 MFFQ9GZY8 342 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 EVA1AQ9H8M9 152 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 FAM60AQ9NP50 221 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 STEAP1Q9UHE8 339 aa10.79□□□□□ -0.68
UBE3D-206ENST00000505226 UBE2QL1A1L167 161 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 D6RAR5 112 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 GTF2F2P13984 249 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 CSF2RBP32927 897 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 KIR3DL2P43630 455 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 EGR4Q05215 589 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 ISXQ2M1V0 245 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF761Q86XN6 746 aaPredicted RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 PDZD9Q8IXQ8 264 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 BAHD1Q8TBE0 780 aaPredicted RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 MCHR2Q969V1 340 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 PAWRQ96IZ0 340 aaKnown RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 MRI1Q9BV20 369 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 SLITRK2Q9H156 845 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 TMEM138Q9NPI0 162 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 IKZF2Q9UKS7 526 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 PCOLCE2Q9UKZ9 415 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 DNASE2O00115 360 aaPredicted RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 SMAD9O15198 467 aaKnown RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 APOC3P02656 99 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 POU3F4P49335 361 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 TFF2Q03403 129 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF776Q68DI1 518 aaPredicted RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 CSNK1A1LQ8N752 337 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 CLEC1AQ8NC01 280 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 OR6K3Q8NGY3 331 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 TNFAIP8L1Q8WVP5 186 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 APMAPQ9HDC9 416 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 IL23AQ9NPF7 189 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 MED11Q9P086 117 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 SPACA6W5XKT8 324 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 NUP210LQ5VU65 1888 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 LINC01553A4QN01 128 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 SERINC4A6NH21 518 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 H3BUI4 141 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 K7EQS6 105 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 EIF4E2O60573 245 aaKnown RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF254O75437 659 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 TACSTD2P09758 323 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 TPMTP51580 245 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 CTXN1P60606 82 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms