RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 IL17RDQ8NFM7 739 aa13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 OR6S1Q8NH40 331 aa13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 VANGL1Q8TAA9 524 aaPredicted RBP13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 CKAP2Q8WWK9 683 aa13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 TXNDC15Q96J42 360 aa13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 ATP6V1G3Q96LB4 118 aa13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 WFDC6Q9BQY6 131 aa13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 TPK1Q9H3S4 243 aa13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 MRPL39Q9NYK5 338 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 CMAHPQ9Y471 501 aa13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 SPEF1Q9Y4P9 236 aa13.81□□□□□ -0.2
PDLIM7-213ENST00000505074 B4DSR2 109 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 RAB36O95755 333 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 ADRA2AP08913 450 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 CSNK1A1P48729 337 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 GALK2Q01415 458 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 SWT1Q5T5J6 900 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 GKAP1Q5VSY0 366 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 SHISA2Q6UWI4 295 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 USP43Q70EL4 1123 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 SLC26A7Q8TE54 656 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 NEU4Q8WWR8 484 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 SLC41A3Q96GZ6 507 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 MS4A3Q96HJ5 214 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 TMEM43Q9BTV4 400 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 EVA1AQ9H8M9 152 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 SLC52A3Q9NQ40 469 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 INTS9Q9NV88 658 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 NDUFAF1Q9Y375 327 aa13.8□□□□□ -0.2
PDLIM7-213ENST00000505074 KPNA4O00629 521 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 PLPP3O14495 311 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 TPST2O60704 377 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 MFN2O95140 757 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 LSP1P33241 339 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 BIDP55957 195 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 NFYCQ13952 458 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 TTMPQ5BVD1 217 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 TTC33Q6PID6 262 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 DLEU7Q6UYE1 221 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 OR5J2Q8NH18 312 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 LRR1Q96L50 414 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 DOK1Q99704 481 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 FOXB1Q99853 325 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 ZNF747Q9BV97 191 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 GRIP1Q9Y3R0 1128 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 PCDHGB1Q9Y5G3 927 aa13.79□□□□□ -0.2
PDLIM7-213ENST00000505074 M0QX08 132 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 RNF13O43567 381 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 CHP2O43745 196 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 CH25HO95992 272 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 MT-ATP6P00846 226 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 UMPSP11172 480 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 IFNGR1P15260 489 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 GIPRP48546 466 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 ARFIP2P53365 341 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 RBBP4Q09028 425 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 CCNIQ14094 377 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 SELPLGQ14242 412 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 MIDNQ504T8 468 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 ENTPD8Q5MY95 495 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 ZNF613Q6PF04 617 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 PXKQ7Z7A4 578 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 PTOV1Q86YD1 416 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 ZNF786Q8N393 782 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 LRRC17Q8N6Y2 441 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 UBASH3BQ8TF42 649 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 CGREF1Q99674 301 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 ARHGDIGQ99819 225 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 SYT3Q9BQG1 590 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 TRIM33Q9UPN9 1127 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 GMEB1Q9Y692 573 aa13.78□□□□□ -0.2
PDLIM7-213ENST00000505074 TMEM129A0AVI4 362 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 M0R233 179 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 FMO6PO60774 539 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 UBL3O95164 117 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 HIST1H2ABP04908 130 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 VIMP08670 466 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 NR4A1P22736 598 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 PCBP3P57721 371 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 RAB1AP62820 205 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 MELKQ14680 651 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 TRIP10Q15642 601 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 DUSP7Q16829 419 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 TREML4Q6UXN2 200 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 THSD4Q6ZMP0 1018 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 SLC35D2Q76EJ3 337 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 HIST3H2AQ7L7L0 130 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 WDFY1Q8IWB7 410 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 OR6T1Q8NGN1 323 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 ADAMTS16Q8TE57 1224 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 HIST1H2ACQ93077 130 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 MRPL24Q96A35 216 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 MRPL37Q9BZE1 423 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 NPHS2Q9NP85 383 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 NANSQ9NR45 359 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 HIF1ANQ9NWT6 349 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 B3GNT2Q9NY97 397 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 SLC7A7Q9UM01 511 aa13.77□□□□□ -0.21
PDLIM7-213ENST00000505074 FZR1Q9UM11 496 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms