RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GGT2P36268 569 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 GIPRP48546 466 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 RPS6KA3P51812 740 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 IL18R1Q13478 541 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 RCN1Q15293 331 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 OCLNQ16625 522 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 NANOGNBQ7Z5D8 188 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 AMIGO2Q86SJ2 522 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 OR1K1Q8NGR3 316 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 RPS4Y2Q8TD47 263 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 RRP15Q9Y3B9 282 aaKnown RBP7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 ATRXP46100 2492 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 FLNCQ14315 2725 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 IGFBP1P08833 259 aaPredicted RBP7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 IFNGR1P15260 489 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 ISL1P61371 349 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 ACSM5Q6NUN0 579 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 BEND4Q6ZU67 534 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 NCCRP1Q6ZVX7 275 aaPredicted RBP7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 DPPA2Q7Z7J5 298 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 SYT9Q86SS6 491 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 ZDHHC13Q8IUH4 622 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 RNF166Q96A37 237 aaPredicted RBP7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 PNRC2Q9NPJ4 139 aaKnown RBP7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 SLC7A10Q9NS82 523 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 ZNF226Q9NYT6 803 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 GPR52Q9Y2T5 361 aa7.28□□□□□ -1.24
CDC42SE2-208ENST00000505065 FREM1Q5H8C1 2179 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 IL2RAP01589 272 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 IGKV3-15P01624 115 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 SCG5P05408 212 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 EPHA2P29317 976 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 MPGP29372 298 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 CENPAP49450 140 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 MRPS34P82930 218 aaKnown RBP7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 NPRL3Q12980 569 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 PTGES3Q15185 160 aaKnown RBP7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 SLC35D3Q5M8T2 416 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 TSPO2Q5TGU0 170 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 ZNF691Q5VV52 312 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 RNLSQ5VYX0 342 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 STAC2Q6ZMT1 411 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 RHOUQ7L0Q8 258 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 SLC37A3Q8NCC5 494 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 TRUB1Q8WWH5 349 aaKnown RBP7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 TFAP2CQ92754 450 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 PTP4A1Q93096 173 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 GLTPQ9NZD2 209 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 PRSS50Q9UI38 385 aa7.27□□□□□ -1.24
CDC42SE2-208ENST00000505065 FBN2P35556 2912 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 CHD3Q12873 2000 aaKnown RBP7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 UPK3AO75631 287 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 BCL10O95999 233 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 LAPTM4AQ15012 233 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 TOMM20Q15388 145 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 FGD3Q5JSP0 725 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 SFRP5Q5T4F7 317 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF684Q5T5D7 378 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 LPCAT4Q643R3 524 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 GPR137CQ8N3F9 429 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNRF4Q8WWF5 429 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 SMPDL3BQ92485 455 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF566Q969W8 418 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 SAMD8Q96LT4 415 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 KATNB1Q9BVA0 655 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 SLC17A5Q9NRA2 495 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 KCNG2Q9UJ96 466 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 EMC9Q9Y3B6 208 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 SLC25A15Q9Y619 301 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 FKBP7Q9Y680 259 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 SLC35F4A4IF30 521 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 OR10H3O60404 316 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 CCDC36Q8IYA8 594 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 MCHR2Q969V1 340 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 EXO5Q9H790 373 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 OR6C68A6NDL8 312 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 EI24O14681 340 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 OPN1LWP04000 364 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 HIST1H1CP16403 213 aaKnown RBP7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 PRKACGP22612 351 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 PEX2P28328 305 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 CD79BP40259 229 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 CASP6P55212 293 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 LSM6P62312 80 aaKnown RBP7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 SRYQ05066 204 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 ENDOGQ14249 297 aaKnown RBP7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 DMRTC2Q8IXT2 367 aaPredicted RBP7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 CDK20Q8IZL9 346 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF610Q8N9Z0 462 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 OR2T33Q8NG76 320 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 MOV10Q9HCE1 1003 aaKnown RBP7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 TMEM38BQ9NVV0 291 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 FAM118AQ9NWS6 357 aa7.27□□□□□ -1.25
CDC42SE2-208ENST00000505065 MED12Q93074 2177 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF503-AS2A6NEH8 195 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF99A8MXY4 864 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 PRODHO43272 600 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 MITFO75030 526 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 SLC43A1O75387 559 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 SRSF10O75494 262 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms