RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 FBP2O00757 339 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 GPR171O14626 319 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 EIF1BO60739 113 aaKnown RBP4.22□□□□□ -1.73
CDH9-203ENST00000505045 EDF1O60869 148 aaKnown RBP4.22□□□□□ -1.73
CDH9-203ENST00000505045 ZNF432O94892 652 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 AHSA1O95433 338 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 TGDSO95455 350 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 UQCRBP14927 111 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 ETS2P15036 469 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 GPX2P18283 190 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 MPGP29372 298 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 PRKAR1BP31321 381 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 ATP4BP51164 291 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 COPZ1P61923 177 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 IL13RA1P78552 427 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 DUSP7Q16829 419 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 TBRG1Q3YBR2 411 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 ALG10BQ5I7T1 473 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 REEP3Q6NUK4 255 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 NIPAL3Q6P499 406 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 CRIP3Q6Q6R5 217 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 SLC22A25Q6T423 547 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 AAED1Q7RTV5 226 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 ZNF440Q8IYI8 595 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 ZNF525Q8N782 197 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 C1orf162Q8NEQ5 155 aaPredicted RBP4.22□□□□□ -1.73
CDH9-203ENST00000505045 DYDC1Q8WWB3 177 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 PMM1Q92871 262 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 SLC25A36Q96CQ1 311 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 MUCL1Q96DR8 90 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 TMEM38AQ9H6F2 299 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 SLC17A5Q9NRA2 495 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.22□□□□□ -1.73
CDH9-203ENST00000505045 MOKQ9UQ07 419 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 B3GALT5Q9Y2C3 310 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 GMEB1Q9Y692 573 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 TENM1Q9UKZ4 2725 aa4.22□□□□□ -1.73
CDH9-203ENST00000505045 A0A0G2JND7 137 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 HMGB1P1B2RPK0 211 aaPredicted RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 C5orf58C9J3I9 102 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 SSX4O60224 188 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 GPRIN2O60269 458 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 MFN2O95140 757 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 LYPD3O95274 346 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 CECR9P0C854 216 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 TNFRSF1BP20333 461 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 GRPRP30550 384 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 CALCRP30988 508 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 TTKP33981 857 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 GZMMP51124 257 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 CDH12P55289 794 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 CLDN17P56750 224 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 RGS8P57771 180 aaPredicted RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 NFYCQ13952 458 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 TM4SF20Q53R12 229 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 RUNDC3AQ59EK9 446 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 RABL3Q5HYI8 236 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 DHRS4L2Q6PKH6 230 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 TMEM108Q6UXF1 575 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 P2RY8Q86VZ1 359 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 TMEM123Q8N131 208 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 MUC15Q8N387 334 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 LSMEM1Q8N8F7 131 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 OR6T1Q8NGN1 323 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 OR1K1Q8NGR3 316 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 MFSD8Q8NHS3 518 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 TAMM41Q96BW9 452 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 NEIL1Q96FI4 390 aaPredicted RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 MAGEB18Q96M61 343 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 ANKRD27Q96NW4 1050 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 SORCS2Q96PQ0 1159 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 CGREF1Q99674 301 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 NAA11Q9BSU3 229 aaPredicted RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 EMC6Q9BV81 110 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 SF3B5Q9BWJ5 86 aaKnown RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 TAPBPLQ9BX59 468 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 TMEM120AQ9BXJ8 343 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 PIF1Q9H611 641 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 NGBQ9NPG2 151 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 FGFR1OP2Q9NVK5 253 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 MED29Q9NX70 200 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 UPB1Q9UBR1 384 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 TESQ9UGI8 421 aaKnown RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 POU2F3Q9UKI9 436 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 IFT52Q9Y366 437 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 A0A087WUJ7 227 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 TMEM247A6NEH6 219 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 CPSF4LA6NMK7 179 aaKnown RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 ZNF587BE7ETH6 402 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 MS4A18H0YCH9 400 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 KPNA4O00629 521 aaPredicted RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 GSTA4O15217 222 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 SHOX2O60902 331 aaPredicted RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 SERPINI2O75830 405 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 BGLAPP02818 100 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 IGFBP1P08833 259 aaPredicted RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 PTAFRP25105 342 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 FKBP2P26885 142 aaKnown RBP4.21□□□□□ -1.74
CDH9-203ENST00000505045 MAP2K6P52564 334 aa4.21□□□□□ -1.74
CDH9-203ENST00000505045 HMGA2P52926 109 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms