RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 FGFBP3Q8TAT2 258 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 RNF217Q8TC41 542 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 RASSF5Q8WWW0 418 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 LIPHQ8WWY8 451 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 BTBD10Q9BSF8 475 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 C1orf21Q9H246 121 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 ZNF442Q9H7R0 627 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 MOV10Q9HCE1 1003 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 C20orf141Q9NUB4 165 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 CMTM6Q9NX76 183 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 ZNF229Q9UJW7 825 aa12.11□□□□□ -0.47
PDLIM7-211ENST00000504318 C11orf98E9PRG8 122 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 KPNA4O00629 521 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 CRLF1O75462 422 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 F12P00748 615 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 HLA-HP01893 362 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 CRYAAP02489 173 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 PGA4P0DJD7 388 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 PGA3P0DJD8 388 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 ADORA3P0DMS8 318 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 ZNF35P13682 527 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 B4GALT1P15291 398 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 ARR3P36575 388 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 SERPINF1P36955 418 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 IDH3GP51553 393 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 BIDP55957 195 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 LSM11P83369 360 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 RUNX1T1Q06455 604 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 FHL1Q13642 323 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 RAB35Q15286 201 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 ERICH5Q6P6B1 374 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 TTC33Q6PID6 262 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 SLC35D2Q76EJ3 337 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 ZNF584Q8IVC4 421 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 CCDC36Q8IYA8 594 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 OR4F15Q8NGB8 312 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 TMEM255BQ8WV15 326 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 MCUR1Q96AQ8 359 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 SLC7A6OSQ96CW6 309 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 FBXO17Q96EF6 278 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 DOK1Q99704 481 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 FOXB1Q99853 325 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 SH3GL1Q99961 368 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 ECSITQ9BQ95 431 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 MRPL13Q9BYD1 178 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 POLR2J2Q9GZM3 115 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 POLR2J3Q9H1A7 115 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 MMADHCQ9H3L0 296 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 NANSQ9NR45 359 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 NDE1Q9NXR1 346 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 A4GNTQ9UNA3 340 aa12.1□□□□□ -0.47
PDLIM7-211ENST00000504318 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.472e-7■■■□□ 18.1
PDLIM7-211ENST00000504318 B2RBV5 119 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 B9A039 149 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 OR5F1O95221 314 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 MT-ND1P03886 318 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 OR4A8P0C604 315 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 AHCYP23526 432 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 KDELR2P33947 212 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 THBS4P35443 961 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 RBM34P42696 430 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 OR1E2P47887 323 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 PPOXP50336 477 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 ZNF133P52736 654 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 DSCR9P59020 149 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 MXRA7P84157 204 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 VLDLRP98155 873 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 IL1RL1Q01638 556 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 RPL18Q07020 188 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 PIN1Q13526 163 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 MELKQ14680 651 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 ZNF813Q6ZN06 617 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 TSEN54Q7Z6J9 526 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 SLC15A3Q8IY34 581 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 POU5F2Q8N7G0 328 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 RP9Q8TA86 221 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 RCN3Q96D15 328 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 NMD3Q96D46 503 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 RHNO1Q9BSD3 238 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 ULBP2Q9BZM5 246 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 MAN2C1Q9NTJ4 1040 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 GLTPQ9NZD2 209 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 SH3GLB1Q9Y371 365 aa12.09□□□□□ -0.47
PDLIM7-211ENST00000504318 ATRQ13535 2644 aa12.08□□□□□ -0.47
PDLIM7-211ENST00000504318 FFAR1O14842 300 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 PRSS23O95084 383 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 COX4I1P13073 169 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 SLC25A16P16260 332 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 NR4A1P22736 598 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 CSNK1A1P48729 337 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 CHRNB3Q05901 458 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 FXNQ16595 210 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 CYBRD1Q53TN4 286 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 CLEC2AQ6UVW9 174 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 SKA3Q8IX90 412 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 MICU2Q8IYU8 434 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 C10orf53Q8N6V4 93 aa12.08□□□□□ -0.48
PDLIM7-211ENST00000504318 SLC26A7Q8TE54 656 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms