RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 OTX1P32242 354 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 YAP1P46937 504 aaKnown RBP3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 MEOX2P50222 304 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 ALKBH6Q3KRA9 238 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 PRR30Q53SZ7 412 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 TCTEX1D4Q5JR98 221 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 SLC8B1Q6J4K2 584 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 CLEC2AQ6UVW9 174 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 SLC25A48Q6ZT89 311 aaKnown RBP3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF677Q86XU0 584 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 CMTM7Q96FZ5 175 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF578Q96N58 590 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 TGS1Q96RS0 853 aaKnown RBP3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 FAIM2Q9BWQ8 316 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF702PQ9H963 129 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 GCNT4Q9P109 453 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 PITPNC1Q9UKF7 332 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 PSME2Q9UL46 239 aa3.96□□□□□ -1.78
HMGB1P3-201ENST00000502802 MEGF6O75095 1541 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 ANKRD36BQ8N2N9 1353 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 USP47Q96K76 1375 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 TRBV11-1A0A0K0K1C0 115 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 H0YC42 278 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 CASC3O15234 703 aaKnown RBP3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 HCRTR1O43613 425 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 CRLF1O75462 422 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 H6PDO95479 791 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 IGHV3-23P01764 117 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF43P17038 809 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 KIR2DS4P43632 304 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 P2RY4P51582 365 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 MERTKQ12866 999 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 CHRNA6Q15825 494 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 MARCH8Q5T0T0 291 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 TIGD3Q6B0B8 471 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 TFAP2EQ6VUC0 442 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF589Q86UQ0 364 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 SLC26A11Q86WA9 606 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 PLA2G4DQ86XP0 818 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 RDH10Q8IZV5 341 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF525Q8N782 197 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 CCDC71LQ8N9Z2 235 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 FNDC5Q8NAU1 212 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 B3GNT7Q8NFL0 401 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 PLPPR1Q8TBJ4 325 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 GPR151Q8TDV0 419 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 FOXN4Q96NZ1 517 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 HIST1H4GQ99525 98 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 BPIFA3Q9BQP9 254 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 CNPY3Q9BT09 278 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 C20orf24Q9BUV8 137 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 DEFB126Q9BYW3 111 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 ACTR6Q9GZN1 396 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 GEMIN7Q9H840 131 aaKnown RBP3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 GIN1Q9NXP7 522 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 TREM2Q9NZC2 230 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 B4GALT7Q9UBV7 327 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 UGT2A1Q9Y4X1 527 aa3.95□□□□□ -1.78
HMGB1P3-201ENST00000502802 RTL1A6NKG5 1358 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 NSG1A0A0A6YYJ2 146 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 CLOCKO15516 846 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 BCL2L11O43521 198 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 CGAP01215 116 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 FGF1P05230 155 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 GZMAP12544 262 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 TBPP20226 339 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 PRDX3P30048 256 aaKnown RBP3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 BTDP43251 543 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 TNNT2P45379 298 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR3A4PP47883 348 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 KLK7P49862 253 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 SLC26A2P50443 739 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 EGFEM1PQ0D2K5 195 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 UTF1Q5T230 341 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 SASS6Q6UVJ0 657 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 BAIAP2L2Q6UXY1 529 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 EIF3MQ7L2H7 374 aaKnown RBP3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 NIPA1Q7RTP0 329 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF571Q7Z3V5 609 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 HSD17B13Q7Z5P4 300 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 MFSD6LQ8IWD5 586 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 OFCC1Q8IZS5 231 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 SLC39A11Q8N1S5 342 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 TMEM252Q8N6L7 170 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR6C4Q8NGE1 309 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 ACMSDQ8TDX5 336 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 MS4A4EQ96PG1 132 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 AUNIPQ9H7T9 357 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 PTGES2Q9H7Z7 377 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 ABCD2Q9UBJ2 740 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 Q9UF83 564 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 KIF25Q9UIL4 384 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 VANGL2Q9ULK5 521 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 TRAF3IP3Q9Y228 551 aa3.94□□□□□ -1.78
HMGB1P3-201ENST00000502802 PCNTO95613 3336 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 C4BP0C0L5 1744 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 INSRP06213 1382 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 MAP3K5Q99683 1374 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 CCDC88AQ3V6T2 1871 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms