RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 OR2M2Q96R28 347 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 THAP7Q9BT49 309 aaPredicted RBP6.76□□□□□ -1.33
PDGFC-203ENST00000502773 TCEAL2Q9H3H9 227 aaPredicted RBP6.76□□□□□ -1.33
PDGFC-203ENST00000502773 TAS2R3Q9NYW6 316 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 KLHL9Q9P2J3 617 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 GLS2Q9UI32 602 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 ALG5Q9Y673 324 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 NPIPA5A0A0B4J1W7 369 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 CDC42EP2O14613 210 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF208O43345 1280 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 LY86O95711 162 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 STOMP27105 288 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 DHPSP49366 369 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 SLC37A1P57057 533 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 RPL27P61353 136 aaKnown RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ALKBH1Q13686 389 aaKnown RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 EXT1Q16394 746 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 OPN5Q6U736 354 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 HMGN2P46Q86SG4 172 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 FRMD1Q8N878 549 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 CCDC107Q8WV48 283 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 TCTEX1D2Q8WW35 142 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF587Q96SQ5 575 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 NAA11Q9BSU3 229 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 FAM117AQ9C073 453 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 MMP25Q9NPA2 562 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 PISDQ9UG56 409 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 MGAT4AQ9UM21 535 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ANKUB1A6NFN9 424 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ACOT7O00154 380 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 CDC123O75794 336 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 CSNK1EP49674 416 aaKnown RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 MEOX2P50222 304 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 IL11RAQ14626 422 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 C9orf152Q5JTZ5 239 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 POMZP3Q6PJE2 187 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 PPP1R3BQ86XI6 285 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF761Q86XN6 746 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 SDR9C7Q8NEX9 313 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 OR4D9Q8NGE8 314 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 CLDN23Q96B33 292 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 NXPE2Q96DL1 559 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ZMYND19Q96E35 227 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ADOQ96SZ5 270 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 RBCK1Q9BYM8 510 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 WWTR1Q9GZV5 400 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 TXNIPQ9H3M7 391 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 PPP4R1LQ9P1A2 415 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 CACNG2Q9Y698 323 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 RNF215Q9Y6U7 377 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 TMED7-TICAM2A0A0A6YYA0 188 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 CBY3A6NI87 242 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 FAM183AA6NL82 134 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 POM121CA8CG34 1229 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ST8SIA5O15466 376 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 FZD7O75084 574 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 HIST1H1CP16403 213 aaKnown RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 MAOAP21397 527 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 SSTR2P30874 369 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 MNDAP41218 407 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 MMP15P51511 669 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 PAPD4Q6PIY7 484 aaKnown RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 TMEFF1Q8IYR6 380 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 OR2AJ1Q8NGZ0 328 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 MFSD8Q8NHS3 518 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 TSEN15Q8WW01 171 aaKnown RBP6.75□□□□□ -1.33
PDGFC-203ENST00000502773 MRGPRX4Q96LA9 322 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 DEFB126Q9BYW3 111 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 ADAM19Q9H013 955 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 FLRT3Q9NZU0 649 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 TMED7Q9Y3B3 224 aa6.75□□□□□ -1.33
PDGFC-203ENST00000502773 MYO7AQ13402 2215 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 PDE4DIPQ5VU43 2346 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 J3QRE1 110 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 GSTZ1O43708 216 aaPredicted RBP6.74□□□□□ -1.33
PDGFC-203ENST00000502773 ALOX12BO75342 701 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 KRT33AO76009 404 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 ATG12O94817 140 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 TFPIP10646 304 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 PTGER1P34995 402 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 DNASE1L1P49184 302 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 SNTB2Q13425 540 aaKnown RBP6.74□□□□□ -1.33
PDGFC-203ENST00000502773 RAB12Q6IQ22 244 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 BCDIN3DQ7Z5W3 292 aaKnown RBP6.74□□□□□ -1.33
PDGFC-203ENST00000502773 NRARPQ7Z6K4 114 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 SIRT6Q8N6T7 355 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 OR10Z1Q8NGY1 313 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 OR6N2Q8NGY6 317 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 C1orf216Q8TAB5 229 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 RLN3Q8WXF3 142 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 MAFIPQ8WZ33 124 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 PTP4A1Q93096 173 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 KCNJ15Q99712 375 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 PRR14Q9BWN1 585 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 ABCG5Q9H222 651 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 METTL8Q9H825 291 aaKnown RBP6.74□□□□□ -1.33
PDGFC-203ENST00000502773 RASD1Q9Y272 281 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 B3GALT5Q9Y2C3 310 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 V9GYH0 126 aa6.74□□□□□ -1.33
PDGFC-203ENST00000502773 C2orf16Q68DN1 1984 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms