RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 EIF3IQ13347 325 aaKnown RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 IL18Q14116 193 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 OXA1LQ15070 435 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 NTRK2Q16620 822 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 TP53I3Q53FA7 332 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 SOWAHCQ53LP3 525 aaPredicted RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 PYDC2Q56P42 97 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 YIF1BQ5BJH7 314 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ZNF468Q5VIY5 522 aaPredicted RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 MZT2BQ6NZ67 158 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 LYPD4Q6UWN0 246 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 APOOLQ6UXV4 268 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 CEACAM19Q7Z692 300 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 SLC22A16Q86VW1 577 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 LRRC28Q86X40 367 aaPredicted RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 TMEM156Q8N614 296 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 LRRC17Q8N6Y2 441 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 YIPF7Q8N8F6 280 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 TEX19Q8NA77 164 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 LRRC75AQ8NAA5 344 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ZBTB44Q8NCP5 570 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ADPRHL1Q8NDY3 354 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 OR2Y1Q8NGV0 311 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 TAAR8Q969N4 342 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ZBTB8AQ96BR9 441 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 MOGAT1Q96PD6 335 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 TSPAN32Q96QS1 320 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 CTRCQ99895 268 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 POTEKPQ9BYX7 375 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 NMNAT2Q9BZQ4 307 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ENKD1Q9H0I2 346 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ZNF700Q9H0M5 742 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ARRDC1-AS1Q9H2J1 176 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ISG20L2Q9H9L3 353 aaKnown RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 APMAPQ9HDC9 416 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 CHST11Q9NPF2 352 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 SACM1LQ9NTJ5 587 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 RHBDL2Q9NX52 303 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ABI3Q9P2A4 366 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ZNF346Q9UL40 294 aaKnown RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 YARS2Q9Y2Z4 477 aaKnown RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 SDK2Q58EX2 2172 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 CACNA1CQ13936 2221 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 IGHV1-45A0A0A0MS14 117 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 TRAV1-2A0A0B4J238 106 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 OR6C68A6NDL8 312 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 TMEM212A6NML5 194 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 GJE1A6NN92 205 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 CTDSP2O14595 271 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 OGG1O15527 345 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 TLX3O43711 291 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 PRKNO60260 465 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 SELENOFO60613 162 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 LALBAP00709 142 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 RAB40ALP0C0E4 278 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 PRKAR1AP10644 381 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 IMPDH2P12268 514 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ZNF823P16415 610 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 RBMS1P29558 406 aaKnown RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 CD79BP40259 229 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 PSMD7P51665 324 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 DLX5P56178 289 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 OR12D2P58182 307 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 RPS15P62841 145 aaKnown RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 PITPNAQ00169 270 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 TLE3Q04726 772 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 EGR4Q05215 589 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 RASGEF1BQ0VAM2 473 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ZP4Q12836 540 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 FOXF1Q12946 379 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 FHL1Q13642 323 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 PCOLCEQ15113 449 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ANGPT1Q15389 498 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 OR7A5Q15622 319 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 GXYLT1Q4G148 440 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ACSM3Q53FZ2 586 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 HSD17B12Q53GQ0 312 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 MESTQ5EB52 335 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 SLC25A53Q5H9E4 307 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ZNF362Q5T0B9 420 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 IDNKQ5T6J7 187 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 HACD4Q5VWC8 232 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 DMKNQ6E0U4 476 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 SLC18B1Q6NT16 456 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 TMEM81Q6P7N7 255 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 FAM198BQ6UWH4 519 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 C6orf15Q6UXA7 325 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 B3GLCTQ6Y288 498 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 H1FNTQ75WM6 255 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 NDUFAF7Q7L592 441 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 SYT9Q86SS6 491 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 RAB43Q86YS6 212 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 LAX1Q8IWV1 398 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 MAML2Q8IZL2 1156 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 BMPERQ8N8U9 685 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 TMEM105Q8N8V8 129 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 SLC38A9Q8NBW4 561 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 OR10H5Q8NGA6 315 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 OR2I1PQ8NGU4 316 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ZNF417Q8TAU3 575 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms